Lagenorhynchus albirostris (white-beaked dolphin): 132529595
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Entry
132529595 CDS
T10760
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132529595 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lalb03041
]
132529595 (PRPF40B)
Spliceosome [BR:
lalb03041
]
Complex A
U1 snRNP components
U1 related factors
132529595 (PRPF40B)
Complex B
132529595 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
RhoGAP-FF1
WW_2
Motif
Other DBs
NCBI-GeneID:
132529595
NCBI-ProteinID:
XP_060022283
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All DBs
Position
11:complement(63393671..63414492)
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AA seq
908 aa
AA seq
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MKTRSNILFIRRRVMRWQDQREATEVGSRFWSPAPSSACPLPTGAPHDATTLHASSRNPP
TFSSNGAPPDESETTGHPPYATWHHAPNASTNRGTTTTHTDTRNGTTHDARDADASGARH
RSAAVAGTGPPRALWSEHVAPDGRIYYYNADDKQSVWEKPSVLKSKAELLLSQCPWKEYK
SDTGKPYYYNNQSKESRWTRPKDLDDLEALVKQEAAGKRQQPRTLQPQPSQPQPDPPPVP
PGPTLVPTGLLEPEPGGSEDCDVSEAAQPLEQGFLQQPEEGPSSSAGQHQPPQQEEEESK
PEPERSGLSWSNREKAKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQA
FNAYKAQREKEEKEEARLKAKEAKQTLQHFLEQHERMTSTTRYRRAEQTFGELEVWAVVP
ERDRKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKSILDGMSSVNFQTTWSQAQQYLMDN
PSFAQDHQLQNMDKEDALICFEEHIRALEREEEEERERARLRERRQQRKNREAFQTFLDE
LHETGQLHSMSTWMELYPAVSTDVRFANMLGQPGSTPLDLFKFYVEELKARFHDEKKIIK
DILKDRGFCVEVNTAFEDFAHVISFDKRAAALDAGNIKLTFNSLLEKAEAREREREKEEA
RRLRRREAAFRSMLRQAVPAVELGTAWEEVRERFVCDSAFEQITLESERIRLFREFLQVL
ETECQHLHSKGRKHGRKGKKHHRKRSHSPSGSESEDEELPPPSLRPPRRRRRNPSESGSE
PSSSLDSIESGGAALGGRGSPSSRLLLGSDHGLRKVKKPKKRTKKRRHKSNSPESETDPE
EKAGKESDEKEPEQDKDRDLRRAELPNRSAGFGIKKEKTGWDTSESELSEGELERRRRTL
LQQLDDHQ
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccagaagtaacattctgttcatcagaaggagagtgatgagatggcaggatcag
agagaagcaacggaagtcggttcccgattctggtccccggcccccagcagcgcctgcccc
cttcccaccggggccccccatgatgccaccacccttcatgcctcctccaggaatcccccc
accttttcctccaatggggctccccccgatgagtcagagaccaccggccatcccccctat
gccacctggcatcatgcccccaatgcttccaccaataggggcaccaccaccactcacaca
gataccaggaatggtaccacccatgatgccagggatgctgatgccagcggtgcccgtcac
cgcagcgctgctgtggctgggacgggccctccgagggccctgtggagtgagcatgtggcc
cctgatgggcgcatctactactacaatgctgacgacaagcagtccgtgtgggagaagccc
agcgtgctcaagtccaaggcagagctcctgctatcccagtgtccctggaaagagtacaag
tcggacacaggcaaaccttactactataacaaccagagtaaggagtcccgctggacccgg
cccaaggacctggatgacctggaggctctagtcaaacaagaggctgcagggaaacggcag
cagccacggacactacagcctcagccttctcagccacagcctgaccccccacctgtgccg
cctggccccaccttggtgcccacgggcctcctagaacctgagccaggtgggagtgaagat
tgcgatgtgtcagaggctgcccagcctctggagcaggggttcttgcagcagccagaggag
ggccccagcagttctgctggacagcatcagccaccacagcaggaggaagaggaatcaaag
ccagaaccggagaggtctggcctcagttggagcaatcgggagaaggcaaagcaggccttc
aaggagctgctgagggataaggctgtcccctccaatgcttcgtgggaacaggccatgaag
atggtggtcaccgacccccgttacagtgccttgcccaaactgagtgagaaaaagcaggca
ttcaatgcctacaaggcgcagcgggagaaggaggagaaggaagaggcccggctaaaagcc
aaggaggccaagcagaccttgcagcatttcttggagcagcatgagcgcatgacctccacc
acccgctaccggcgggcagaacagacctttggggagctggaggtctgggctgtggtcccc
gagagggatcgaaaagaggtttatgatgatgtccttttcttcctggccaagaaggagaag
gaacaggccaagcagctccggcgccgcaacatccaggccctgaagagcatcctggatggg
atgagtagcgtcaacttccaaaccacatggtcccaggcccagcagtacctcatggataac
cccagctttgctcaggaccatcagctacagaacatggacaaggaagatgcgctgatctgc
tttgaggagcacatccgtgctttggagagggaggaggaggaggagcgagagagggcccgg
cttcgggagcggcgccagcagcgcaagaaccgggaggcctttcagaccttcctggatgag
ctgcacgagacagggcagctgcactctatgtccacctggatggagctgtacccagcagtc
agcactgatgtccgctttgccaacatgctgggccagccgggctccacccctctggactta
ttcaagttctatgtggaggagttgaaggcacgattccatgatgagaagaagatcattaag
gacatccttaaggaccggggcttctgcgtggaggtgaacacagcctttgaggacttcgcc
cacgtcataagctttgacaagagggctgctgcgctggatgcaggcaacatcaagctgact
ttcaatagtctgctggagaaagcagaggcgcgggagagagagcgggagaaggaggaggca
cgaaggctgcggcgcagagaagctgcctttcgaagcatgctgaggcaggctgtgcctgct
gtggagctgggcactgcctgggaagaggtccgtgagcgctttgtgtgcgactcagccttt
gagcagatcaccctggagtcggagcggatccggctcttccgggagttcctgcaggtactg
gagactgaatgccagcacctccacagcaaaggccggaaacacggcagaaagggcaagaag
caccatcgcaagcgttcccactcgccctcaggctctgagtcagaagatgaagagctgccc
ccaccatctctccggccccccaggcggaggcggcggaacccctcggagtcaggctctgag
ccctcttcctcacttgattctattgaaagtgggggtgctgcccttggaggacggggttcc
ccatcctcccgccttctccttggatcagatcatggccttcggaaagtcaagaaaccaaaa
aagagaactaagaagagaagacacaagtcgaacagtcctgagagtgagacagaccctgag
gagaaagcgggcaaggagagtgatgagaaagaaccagagcaggacaaggacagggacctc
cggcgggcagagctccctaaccgctccgcaggctttggaatcaagaaggagaagacgggc
tgggacacatcggaaagcgagctgagcgagggtgagctggaaagacggcggcggacgctc
ctgcagcagctggatgaccaccagtga
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