Lagenorhynchus albirostris (white-beaked dolphin): 132529620
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Entry
132529620 CDS
T10760
Symbol
DDX23
Name
(RefSeq) probable ATP-dependent RNA helicase DDX23
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132529620 (DDX23)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lalb03041
]
132529620 (DDX23)
Enzymes [BR:
lalb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132529620 (DDX23)
Spliceosome [BR:
lalb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
132529620 (DDX23)
Complex C
U5 SnRNP specific factors
132529620 (DDX23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-GeneID:
132529620
NCBI-ProteinID:
XP_060022344
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All DBs
Position
11:64033575..64048648
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AA seq
818 aa
AA seq
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MAGELADKKDREASPSKEERKRSRTPDRERDRDRDRKSSPSKDRKRHRSRERRRGGSRSR
SRSRSKSTERERRHKERERDKERDRNKKDRDRDKDGHRRDRKRSSLSPGRGKDFKSRKDR
DSRKDEEDEHGDKKPKAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQEVE
ERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMERETNGNEDEEGRQKIREEKD
KSKELHAIKERYLGGIKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLGRG
FIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQKKL
DEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAI
PIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQ
QIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSR
CTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQT
VMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQG
FDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATD
VAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQA
ILESPVSSCPPELANHPDAQHKPGTILTKKRREETIFA
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagagctggctgataagaaggaccgtgaggcatcaccttccaaggaggaaagg
aagcgatctcggactcctgacagagaacgggatagagaccgagaccggaagtcttcccca
tctaaagataggaaacggcatcgttcaagggaaaggcgtcgaggaggcagccgttctcgt
tcccgttcccgttccaagtccacagaaagagaacgccggcacaaagaacgagagcgagat
aaggagcgtgatcggaataagaaggaccgagatcgggataaggatgggcacagacgggac
cgcaagcgatccagtttatctcctggccgaggaaaagattttaaatctcggaaagacaga
gactctaggaaggatgaagaggatgaacatggtgataagaagcctaaggcccagccatta
tccctggaggaacttctggccaagaaaaaggctgaggaagaagctgaggctaagcccaag
ttcctctccaaagcagaacgagaggctgaagccctaaagcgacggcagcaggaggtggag
gagcggcagaggatgcttgaggaagagaggaagaaaaggaaacagttccaagacttgggc
aggaaaatgttggaagaccctcaggaacgggaacgtcgggaacgcagggagaggatggag
cgggagaccaatggaaatgaggatgaggaagggcggcagaaaatccgggaggagaaggat
aagagcaaggaactgcatgccattaaggagcgttacctgggtggcatcaagaagcggcgc
cggacgaggcatctcaatgaccgcaagtttgtctttgagtgggatgcatctgaggacact
tccattgactacaaccccctgtacaaagaacggcaccaggtgcagttgttggggcgaggc
ttcattgcaggcattgacctaaagcagcagaaacgagagcagtcacgtttctatggagac
ctaatggagaagaggcggacgctggaagaaaaggagcaggaggaggcaagactccgcaaa
cttcgtaagaaggaagccaagcaacgctgggatgataggcattggtcccagaagaagttg
gatgagatgacagacagggactggcggatcttccgtgaggactacagcatcaccaccaaa
ggtggcaagatccccaatcccatccgatcctggaaagactcttctctgcctccacacatc
ttggaggtcatcgataagtgtggctacaaggagccaacacctatccagcgtcaggcaatt
cccattgggctacagaatcgtgacatcattggagtggctgagactggcagcggcaagaca
gcagccttcctcatcccgttgctggtctggattaccactctccccaaaattgacaggatc
gaagagtcagaccagggcccttatgccatcatcctggcccccactcgtgagctggctcag
cagattgaggaagagaccatcaagtttgggaagccgctaggcatccgcactgtggctgtc
attggcggcatctccagagaagaccagggcttcaggctgcgcatgggttgtgagatagtg
attgctactccaggacgtctgattgatgtgctggagaaccgctacctggtgctgagccgc
tgtacctatgtggttctggatgaggcagacaggatgattgatatgggcttcgagccagac
gtccagaagatcctggagcacatgcctgtcagcaaccagaagccggacacggatgaggcc
gaggaccctgagaagatgttggccaacttcgagtcaggaaaacataagtaccgccaaaca
gtcatgttcacggccaccatgcccccagcggtggagcgtctggcccggagctatcttcgg
cgacctgctgtggtgtacattggctctgccggcaagccccacgaacgtgtggaacagaag
gtcttcctcatgtcagagtctgaaaagaggaaaaagctgctggcaatcttggagcaaggc
tttgatccccccatcatcatttttgtcaaccagaagaagggctgtgatgttttggccaaa
tccctggagaagatggggtacaatgcttgtacgctgcatggtggaaaaggccaggagcag
cgagagtttgcactatccaacctcaaggctggggccaaggatattttggtggctacagat
gtggcgggtcgtggtatcgacatccaagatgtgtctatggttgtcaactatgatatggcc
aaaaacattgaagattatatccaccgcattggccgcacgggacgagcaggcaagagtggt
gtggccatcaccttcctcaccaaagaggactctgctgtgttctatgagctgaagcaagcc
atcctggagagcccggtgtcctcctgccccccagagctagccaaccaccccgatgcccag
cacaagccgggcaccatcctcaccaagaagcgccgggaagagaccatctttgcctga
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