Lagenorhynchus albirostris (white-beaked dolphin): 132529689
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Entry
132529689 CDS
T10760
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Brite
Enzymes [BR:
lalb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132529689 (PDZRN4)
Ubiquitin system [BR:
lalb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
132529689 (PDZRN4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132529689
NCBI-ProteinID:
XP_060022521
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Position
11:complement(70620661..71001239)
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AA seq
1030 aa
AA seq
DB search
MGFALERFAEAVDPDFQCRLCGQVLEEPLCTPCGHVFCARCLLPWVARRRRCPLQCQPLA
PGDLYRVLPLRSLVQKLRTQCDYRARGCGHSVGLRELAAHVERCDFGPARRRRRGCVSGP
CGRGGGDASARGGCGSAPGVRRGGTPGVRGGSGRAPGPQVLAWRRREKALLAQLWALQGE
VLLTARRYQKKFTQYMAHVRNFARDPGGGRGRDGEHKPFTIVLERENDTLGFNIIGGRPN
QDNQEETPMEGIYVSKILENGPADRADGLEIHDKIIEVNGKDLSKATHEEAVEAFRNAKE
PIVVQVLRRTPLSKPAYGTAPEVRLVNASTQTDITFEHIMALAKLRPPTPPVPDICPFLL
SDSCHSLHPMEHEFYEDDEYLSSLPADADRTEDFEYEEVELCRVNSQEKLGLTVCYRTDD
EEDTGIYVSEVDPNSIAAKDGRIREGDRILQINGEDAQDREAAVALLSSDECRRIVLLVA
RPESQLEEGWLEDERNEYLEELNLSMLEEQHNEAMQRTASQVEQPKKQEEEEGTTDTATS
SSNNHEKDSGVGRTDESLRNDESSEQENAAEDPNGTSLKSKRELGQSQDTLGSTELQCNE
SFVSGEYIDSDCTGNQDEECERFRQLLELKCKIRKHGEYDLYYSSSTIECNQGGREGVEH
ELQLLNEELRNIELECQNIMQAHRLQKVTDQYGDIWALHEGGFRNYNTSIDMQRGKLDDI
LEHPEKSDKDSSSAYNTAESCRSTPLTVDRSPDSSLPRVINLTNKKNLRSTMAANQSSSG
QSSKESTKAKTTEQGCGIEGKEKTSEGSKLSDPEKTSGEHIPYLSPYHSSSYRYANIPAH
ARHYQSYMQLIQQKSAVEYAQSQLSLVSVCKESQKCSEPKMEWKVKIRSDGTRYITKRPV
RDRILKERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRS
RLECLKESPQSGSEGKKEVNIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTQV
PNAFLSVTAV
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgccctggagcgcttcgccgaagcggtggacccggatttccagtgcaggctg
tgcggccaggtgctggaggagcccctgtgcacgccgtgcgggcacgtcttctgcgcccgc
tgcctgctgccctgggtggcgcggcggcgccggtgcccgctgcagtgccagcccctggcg
ccgggcgatctgtaccgggtgctgcctctgcgcagcctcgtccagaagctgcgcacccag
tgcgactaccgcgcccgcggctgcggccactcggtcgggctgcgcgagctggcggcgcac
gtcgagcgctgcgacttcggccctgcccgccgccgccgccggggttgcgtctccgggccg
tgcggccggggcggcggggacgcgtccgcgcgggggggctgcggctcagcgcccggggtc
cgccgcggcgggacgccgggagtccgtggcgggagcgggcgggcgccagggcctcaagtc
ctggcctggaggcggcgcgagaaggcgctgctggcgcagctctgggcgctgcagggggag
gtgctgctcacggcccgcaggtaccagaagaagttcacccagtacatggctcacgtccgc
aacttcgccagggacccgggcggcggccgcggccgggatggagagcataagccattcact
attgtgttagaaagagaaaatgacactttgggattcaatattataggaggtcgaccaaat
caggataatcaagaagaaacaccaatggaaggaatttatgtttcaaagattttggaaaat
ggacctgctgatagagcagatggcttggaaattcatgacaaaatcattgaggtcaatggg
aaggatctctcaaaggccacccatgaagaggcagtggaagcttttcgaaatgccaaggag
cccattgtggtccaggtgctaaggcgaacacctctcagtaaaccagcctatgggacggcc
ccagaagtgcggctcgtgaacgccagcacccagacggacatcacctttgaacatatcatg
gccctggccaaacttaggccacccacccctccagtgcccgacatctgtccatttctgctc
tcagacagctgccattctcttcatccgatggagcatgaattttatgaggacgatgagtat
ctttccagcttgcctgctgatgcagacagaactgaggactttgaatatgaggaggtcgag
ttgtgtcgtgttaacagtcaagagaagctgggcctgacagtctgttaccgaacggatgat
gaagaagacaccggcatttatgtcagcgaggtagatccaaacagcattgctgccaaagat
ggccggattcgagaaggggatcgtattttgcaaataaatggggaagacgcccaggatcga
gaggcggcggtggccctgctatctagtgatgagtgccggagaatcgtgctgctggtcgca
aggccggagagtcagctggaggaaggctggctagaagatgaaaggaatgaatatttagag
gagttaaacttatcgatgttggaggaacagcataatgaagcaatgcagcgcactgccagt
caggtggagcagccaaaaaaacaagaagaagaagaaggcacaacagacacggcaacatcc
tcatccaacaaccatgagaaggacagtggagtggggcgcacagatgaaagcttgcggaac
gacgagagctcagagcaggagaatgcagccgaggatcccaatggcacatctttgaagagc
aagagagagctggggcagagccaagacactctgggaagcactgaacttcagtgtaatgag
agcttcgtgtctggtgaatacattgactcggactgtactggcaaccaagatgaggagtgc
gaaaggtttcggcagctcttggagctcaaatgcaagattcggaagcatggagagtatgac
ctgtattactcaagcagcacaatagaatgcaatcaagggggacgagagggagtggagcac
gaactacagttgcttaatgaagagctaagaaacattgaacttgagtgccaaaatatcatg
caggctcacaggctccagaaagtgacagaccagtatggagacatctgggcactgcatgag
ggaggattccgaaattataacaccagcatagatatgcagaggggaaaactagatgacatc
cttgaacacccagaaaagtcagacaaagacagttctagtgcttacaacacagctgaaagc
tgcagaagcactccactcactgtggaccgttcccctgacagttccctcccaagagtgatc
aacctcaccaataagaaaaacctgagaagcacaatggcagccaatcagtcctcttctgga
cagagtagtaaagagtcaaccaaagccaaaaccactgaacaaggttgcggcattgaaggc
aaagagaagacttcagaaggcagcaagctttctgatccagagaagaccagcggtgaacac
atcccttacctctctccttaccacagctcctcctatagatatgcaaacatcccagcacat
gcccggcattatcaaagttacatgcagttaattcaacagaagtccgcagtcgagtacgct
cagagccagctcagcttggtgagcgtgtgcaaggagtctcagaagtgctcagaacccaag
atggaatggaaggtgaaaatcaggagtgacgggacacggtacatcaccaagagacccgtg
agggaccgcattctgaaggagcgtgccttaaagatcaaggaggagcggagtggcatgacg
acggacgatgacaccatgagtgagatgaaaatggggcgctactggagcaaagaggagagg
aagcaacacctggtgcgggccaaagagcagcggcgccgccgagagttcatgatgcggagc
cggttggagtgtctcaaggagagtccccagagcggcagcgagggcaagaaggaggtcaac
atcattgaactgagtcacaaaaagatgatgaagaagagaaacaagaaaattttggacaac
tggatgacaatccaagaactgatgacccatggggccaagtcccctgatggcacacaagtt
cctaatgcctttttgtcagtcactgcggtatga
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