Lagenorhynchus albirostris (white-beaked dolphin): 132530232
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Entry
132530232 CDS
T10760
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lalb03021
]
132530232 (SCAF8)
03041 Spliceosome [BR:
lalb03041
]
132530232 (SCAF8)
Transcription machinery [BR:
lalb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
132530232 (SCAF8)
Spliceosome [BR:
lalb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
132530232 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
DAXX_hist_bd
Motif
Other DBs
NCBI-GeneID:
132530232
NCBI-ProteinID:
XP_060023233
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All DBs
Position
12:complement(11918364..12117043)
Genome browser
AA seq
1270 aa
AA seq
DB search
MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN
NVFKSEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPGTPVTPVTPANVVQGLPDPWVS
QITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSILQALDAGLVVQLQALTAQL
TAAAAAASTLNPLEQGVSFNKKLMDRFDFGEDSEHSEEPKKEIPASQLSHVSESVNNSIF
HQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFGSEHSVSPSQGSSQQHFLEPEA
NLDDSIDIQQQDMDIDEGQDGVEEEIFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRS
GSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLW
VGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSSGSYKIG
SKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLEGFAEGGMIDQETVNTEWE
SVKSSEPVKETVQTTQSPPPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFP
VSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPPL
SMTPETVKDVGFGSLVLPGGSVASSLATSTLPAGSVFNPPTKQAEPEEKVPHLIDHQISS
GENTRSVIPNDVSGGSAILGGQPPNVTNNSGILGVQRPNVSSNNEILGVRPSNVSNSSGI
IGAQPPNILNNSGILGIQPPSVSSSSGLLGMLPPNIPNNSGLMGVQPPSVPNTSGLLGTQ
PPAGPQNLPPLNLSNQRMPAMPMLDIRPGLIPQTPGPRFPLMQPGIPPQRGLPPPAVLDS
ALHPPPRGPFAPGDIFSPPERPFLVPGRQSVDNVANPEKRIPLGNDNIQQEGDRDYRFPP
IETRETISRPPPVDVRDVVGRPVDPREGPGRPPLDGRDHFGRPPVDIRENLVRPGIDHLG
RRDHFGFTQEKAWGHRDFDEREHRVLPVYGGPKGLHEERGRFRSGNYRFDPRSGPWNRGF
GQEVHRDFDDRRRPWERQRDRDDRDFDFCREINGSRFGRDRIQNTWVPPPHARVFDFFEG
ATSQRKGDNVPQVNGENTERHAQPPPLPAQSDPELYEKLTSSSEINKEKSDTVADIESEP
VVESTETEGT
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgtgaaaaccttcaatagcgagttgtattccctgaatgactacaagccaccc
atttctaaagcgaaaatgacccaaattactaaagcagccatcaaagctattaagttttat
aaacatgtggtacagagtgttgagaaattcattcagaaatgtaaaccagaatacaaggta
cctggactttatgttattgactctattgtacgacaatctcgacatcagtttggtcaagaa
aaggatgtgttcgcacccagatttagtaataacatcattagcactttccagaatttatat
cgttgccctggagacgacaagagtaaaatagtgagagtattaaacttatggcagaagaat
aatgtatttaaaagtgagattattcaacctcttttggatatggcagcagggattcctcct
ccagttgtcacacctgttttggccagtactactgctgctatgagcaataccccaggaact
cctgtgacacctgttactccagccaatgtggtccaaggtttacctgatccgtgggtgtct
cagataacaaatacagatacacttgcagctgtagctcagatcttacaaagtcctcaaggc
caacagcttcagcagttaatacagactttacagatacagcagcagaagccccagccttcc
atcttgcaagccctggatgccggccttgtggtccagctgcaggctcttacagcacagctc
acagcagcggctgcagcagccagcacccttaatcccctagaacagggagtgtcttttaac
aagaagttgatggataggtttgattttggggaagattctgagcatagtgaagagcccaaa
aaggaaattccagcttctcaactttctcatgtttcagaatctgtgaacaattccatcttt
catcagatagcagaacagctacagcagcaaaatcttgaacatctcagacagcaactcctg
gaacagcaacagcctcaaaaggcaactcctcaggatagtcaagaaggaacatttgggtca
gagcattctgtgtcaccatcacaagggagcagtcaacagcatttccttgaacctgaagca
aatttggatgattccatagatattcagcaacaggatatggatatagatgaagggcaagat
ggagtagaagaggagatctttgaacaggaagcaaagaaagtggctgttcgctcaagatca
agaacgcattcacgatctcgttcaaggtcaccaagaaaacgaaggtctaggtcacggtct
ggttctcgaaagcgtaaacacagaaagcgatcacgctctcgctctagagaaagaaaaagg
aaatcatcacgttcatactcaagtgaaagaagagctagagaaagggagaaagaacgacag
aagaagggattgcctccaattagatctaaaacattaagtgtatgtagtactactctgtgg
gttggccaggtagacaagaaggcaacacagcaagatttaaccaacctgtttgaagagttt
ggacagattgaatccattaatatgattcctcccaggggctgtgcttatgtctgcatggtt
catcgacaagatgcatttcgggctcttcagaaacttagttccgggtcatataaaattggg
tccaaggtcattaagattgcttgggctttaaacaaaggtgtaaaaacagaatacaaacaa
ttctgggatgtggatcttggagtaacatatataccatgggaaaaagttaaagtggatgac
ttggaaggttttgcagaaggaggcatgattgatcaggaaactgtaaatactgagtgggaa
agtgtgaaaagctcagaacccgttaaagagacggtccagacaactcagagcccacctcca
gttgaaaaggagacagtggtcacaacccaggcagaggttttccctccacctgttgctatg
ttacagattccagtagctccagcagtgcctacagttagtttagtcccaccagcatttcct
gtgtcaatgccagttcctcctcctggattcagtccaattcctccaccgccttttctccgc
gcaagttttaacccttcacaaccacctcctggtttcatgccacctccagttccaccacct
gttgtaccaccacctactattccaccagtagtaccaacatctttagtgcagccgccatta
tctatgactccagaaactgtgaaagatgttggatttggtagccttgttttgccaggtggt
tctgttgccagcagtcttgctacttccactctgccagctggaagtgtttttaatcctcca
actaaacaagcagagcctgaagaaaaagtacctcatcttatagaccaccagatttcttct
ggtgaaaacaccagatcagtgattccaaatgatgtttcaggtggctctgcaattttagga
ggacagccgccaaatgtgacgaacaattctggaattctgggagtccaaagaccaaatgta
tcaagtaataatgaaattcttggagtccggccatctaatgtttccaatagttctgggatt
attggagcccagccaccaaatattctaaataactctggaattttgggaatacagccacca
agtgtgtcaagtagttctggacttctgggcatgctacccccaaatatacctaacaattct
ggacttatgggagtacagccacccagtgttccaaatacttctggacttttgggaacacag
ccaccagctgggcctcaaaatttaccccctttaaatctttctaatcaaaggatgcctgca
atgccaatgttagacattcgtccaggactaataccacagacacctggaccaagattccct
ttaatgcagcctggaattccacctcagcggggactccctcccccagcggtgcttgattca
gctcttcatccaccaccccgtggtccttttgctccaggagatatttttagtccacctgaa
agaccttttctagttcctggaagacaaagtgtagacaacgttgctaatccagaaaaaagg
ataccacttgggaatgataacattcaacaggaaggagatagagattaccggtttcctccc
atagaaaccagggaaaccattagtagacctcccccggtggatgttagggatgtggttgga
cggcctgtagatccaagagaaggtcctggaaggcctccattagacggtagagatcacttt
ggacgacctcctgtagatattagagagaaccttgtgaggccaggcatagatcatcttggt
cgaagagaccactttggctttactcaagagaaggcctgggggcatagagattttgacgag
agagagcatcgggttctgcctgtctatggtggtccaaaaggcttacatgaagaaagaggt
agatttcggtctggaaactatcggtttgatcctagaagtggtccttggaacagaggattt
ggacaagaagttcacagagattttgatgaccgcagaagaccctgggagaggcaaagggat
agggatgacagagattttgatttctgcagagaaattaatggaagtcgttttggacgagat
agaattcaaaacacctgggtcccccctcctcatgctcgggtttttgatttttttgaaggg
gccacttctcagcgaaaaggtgataatgtgcctcaggttaatggtgaaaataccgagaga
catgctcagccaccacctttaccagcgcagagtgatcctgaactttatgaaaaactgaca
tcttcaagtgaaataaacaaggagaagagtgacacagttgctgatatagagagtgaacca
gtggtagaaagcacagaaactgaggggacataa
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integrated database retrieval system
