Lagenorhynchus albirostris (white-beaked dolphin): 132530540
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Entry
132530540 CDS
T10760
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03015
mRNA surveillance pathway
lalb05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132530540 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
132530540 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lalb03019
]
132530540 (HBS1L)
Messenger RNA biogenesis [BR:
lalb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
132530540 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
132530540
NCBI-ProteinID:
XP_060023724
LinkDB
All DBs
Position
12:27920667..28002534
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AA seq
686 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDRPSVVEPVEEYDYE
DLKESSNSLLNHQLSGIDQARLFSCLDHMREVLGDAVPDDILIEAVLKNKFDVQKALSVV
LEQDKMQNLKVKSEGAISTGKIAKGKSIDSQSSRSESEIVPKVAKMTVSGKKQTMGFEVP
GVTAEENGHIFHTPQKGHSSEDTGLVSSDVLETASKSALPSHTIQASEEQSSTPTPVKKS
SKLRQQIDIKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQE
SKKAGKSSFAYAWVLDETGEERERGVTMDVGMTKFETKTKVIILMDAPGHKDFIPNMITG
AAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERF
QEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSRELTKWYKGLCLLEQIDSFK
PPQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHD
EPVDWAAAGDHVSLTLVGMDVIKINVGCIFCGPKEPIKVCTRFRARILIFNIEIPITKGF
PVLLHYQTVSEPAVVKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKD
FKELGRFMLRYSGSTIAAGVVTEIKG
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggccaggcatcggaatgtccgaggctataactacgatgaagattttgaagatgatgat
ctctatggccagtctgtagaggatgattattgtatttcaccatcaacagctgctcagttt
atttactcacgacgtgacagaccttcagttgttgaacctgtagaagaatatgattatgaa
gatttgaaagaatcctccaattctcttttgaaccatcagctaagcggaattgatcaagct
cgtcttttttcatgccttgatcacatgagagaggtacttggagatgctgtgccagatgac
atactgattgaagcagttctgaagaacaagtttgatgtgcagaaggctttgtcagtggtt
ctggagcaagataaaatgcagaatttgaaggtcaagagtgagggagcaatatctacagga
aagatagcaaaaggaaaatcaatagattcccagtcatctcgaagtgaatctgaaattgtg
ccaaaagttgctaaaatgactgtatctggaaagaagcaaactatgggatttgaagtgcct
ggagtaactgctgaagaaaatggtcatattttccacacacctcaaaaaggacattctagt
gaagataccggccttgtttcttctgatgtacttgagaccgcttctaaatcagcccttcca
tcccacaccattcaagcatcagaagagcagagttcaacaccgacaccagtgaaaaagtct
agcaagctgaggcaacaaatagatatcaaagcggagctggaaaagcggcaaggagggaag
caactcctcaacctagtggtcattggtcatgttgatgctgggaaaagtactctgatgggc
catttgctttatcttctgggtaatgtaaacaaaagaactatgcataagtatgaacaagag
tctaaaaaggctggcaaatcttcgtttgcatatgcgtgggtcttggatgagactggcgaa
gaaagggaaaggggagtaacaatggatgttggtatgacaaagtttgagaccaaaaccaaa
gttattatattaatggatgctccaggccataaggatttcattccaaatatgattacagga
gcagcccaggcagatgtagcagttttagttgtagatgccagcaggggagagtttgaagct
ggatttgagactgggggacaaacacgagaacatggcctcttggttcgttctctgggagtg
acccagcttgcagttgcagtcaataaaatggatcaggttaattggcaacaagaaaggttt
caagagattactggaaaacttgggcactttcttaagcaagcaggttttaaggaaagtgat
gtagcttttatccctacaagtggtctcagtggtgaaaatctaatcacaagatctcagtca
agggaacttacaaaatggtataaaggactatgtttattagaacaaattgattccttcaag
cctcctcaaagatctgttgacaagcctttcagattatgtgtatctgatgttttcaaagat
caaggatctggattttgtgtaactggtaaaattgaagctggttatatccaaactggtgac
cgactactagcaatgcctcctaatgaaacttgtactgcaaaaggaatcactctgcatgat
gaacctgtcgactgggcggcagcaggcgatcatgttagtcttacgttggttgggatggat
gtcatcaaaatcaatgttggctgcatattttgtggccccaaagaacccattaaggtttgc
actcgtttcagagcccgaatcctcatctttaatattgaaattcctatcactaaaggattt
cctgtgctgttacactaccaaactgtcagtgaacctgccgtggttaaacgattgattagc
gtcttaaacaaaagcactggtgaagtcacaaagaaaaagcctaaattgttgaccaaaggc
cagaatgcattggtggagctacagacacaaagaccagtggctcttgagctgtacaaagac
tttaaagagctggggagattcatgctgcgctacagtggttctaccatagctgctggtgta
gtcaccgagataaaaggctga
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