Lagenorhynchus albirostris (white-beaked dolphin): 132530678
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Entry
132530678 CDS
T10760
Symbol
SHPRH
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lalb04121
]
132530678 (SHPRH)
Enzymes [BR:
lalb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132530678 (SHPRH)
Ubiquitin system [BR:
lalb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132530678 (SHPRH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
PHD
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
132530678
NCBI-ProteinID:
XP_060023980
LinkDB
All DBs
Position
12:19045613..19117083
Genome browser
AA seq
1685 aa
AA seq
DB search
MSSRRKRAPPVRVDEEKQQQLRWNMHEDRRNEPLTSTDDEQSCPGLDSSSAHCIILDDSL
KEEVAHKDKKRCPEVVSVSKSVEEETGGIFSPLSPKLNIVISPCHFDNSWKAFLGELTLQ
LLPEQSLIENFSERSFTLMSSESSCQFVIYVHSECEDIEKKERGLNEPISICDKGIQVES
SFSGEMLEDLGWLQKKKRIKLYQKPEGNHIIKVGIYLLEGGLAKLDFLSDANSRMKKFNQ
LMKRVMEKLYNFIIPDVLEEDEEDSESEPEGQDIDELYHFVKKTHQRETPCIQVDVQHPA
LTPVLRPYQREAVNWMLQQEHFKSTPASENALHFLWREIVTSEGLKLYYNPYTGCIIREY
PNAGPQLLGGILADEMGLGKTVEVLALILTHTRQDVKQDALTLPEGKVVNYFIPSHNSGG
NVKNTETQNMEFEPKEKVQCPPTRVMILTAVKEMNGKKGVSILSIYKYVSSIYRYDVQRN
RSLLKRMLKCLIFEGLVKQIKGHGFSGTFTLGKNYKEEDIHDKTKKQVVGSPRKIQKESR
KPGSKDTDSEYLPSNTSDDDDDPYYYYCKPRRNRSKLRKKPVVPSTKKEKSQLNINLNSQ
DHCPATGDSAVTDVTTSESTCVFEVKQKHAAKDQAESLNPVGHDMPHSNIMGPYNSSDYH
FECICGEVDQVDRKPRVQCLKCHLWQHAKCVNYEEKNLKIKPFYCPHCLVAMEPVSTRAT
LIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVLRSE
LNYVDIPHSNSEDGRRLRNQKRYMAIPSPLVAVEWWRICLDEAQMVECPTVKAAEMAQRL
SGINRWCISGTPVQRGLEDLFGLVVFLGIEPYCVKHWWVRLLYRPYCKKNPQLLYSFIAK
ILWRSAKKDVIDQIQIPPQTEEIHWLHFSPVERHFYHRQHEVCCQDAVVKLRKISDWALK
LSSLDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEE
AHRQLVCALNGLAGIHIIKDEYALAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMEL
LIAKHPGIPPTLRDGRLEEEAKQLREHYMSKCNTEVAEAQQALLPVQQTVRDLQRKIYSN
SPWWLNVIHRAMEFGIEEELVQRVRNEITSNYKQQTGKLSMSEKFHDCRGLQFLLTTHME
ELSKFQKQVRDAVKNLEGPPSRHVIESATICHLRPTRLPLNCCVFCKADELFTEYESKLF
SHTVKGQTAIFEEMIEDEEGLVDDRIPTTNRGLWAISETERSMKALLSFAKSHRFDVEFI
DEGSTSMDLFEAWKKEYKLLHEYWMALRNRVSAVDELAMATERLRVRDPREPKPSPPVPH
IIEPHEVEQNRIKLLNDKAVATSQLQKKLGQLLYLTNLEKSQDKTSGGINPEPCPICARQ
LGKQWAVLTCGHCFCNECISIIIEQYSVGSHRSSIKCAICRQTTSHKEISYVFTSEKASQ
EEDIPVKGSHSTKVEAVVRTLMRIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQI
SRVKTFQENLSAFKHDPQINILLLPLHTGSNGLTIIEATHVLLVEPILNPAHELQAIGRV
HRIGQTKPTIVHRFLIKATIEERMQAMLKTAERSHTSPSAKHSEASVLTVADLADLFTKE
TEDLE
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgacggaaacgtgctcctccagtgagggtagatgaggaaaagcaacagcag
cttcgttggaatatgcatgaggacagaaggaatgaacctctcacctcaactgatgacgag
cagtcctgcccaggtttggactcctcttctgctcactgcatcatcctagatgatagtcta
aaggaagaagtggctcacaaagataagaagaggtgtccagaagtggtgagcgtctcaaaa
tcagttgaagaagagactggtggcattttttcccctttgtctccaaagctgaatattgtg
atttctccctgtcactttgataattcttggaaagcatttctaggggaattaactcttcag
cttcttcctgaacagagtttaattgaaaatttttctgaaaggagttttacactgatgagt
tcagagtcgagctgtcagtttgtgatctatgttcattcagaatgcgaagatatagagaaa
aaagaaagaggactcaacgagccaatcagtatttgtgacaaaggtattcaagtggaatca
tcctttagtggtgaaatgttagaagatttggggtggctgcaaaagaagaaaagaataaaa
ctttaccaaaaaccagaaggaaatcacattatcaaggttggaatttatcttttggaaggt
ggcctagcaaaactagattttctgagtgatgcaaactcaagaatgaaaaagttcaatcaa
ctcatgaagagagtgatggaaaagttatacaattttattattccagatgtgttggaagag
gatgaggaagattcagagagtgagccagagggacaggacattgatgaactctatcacttt
gtgaagaaaacacatcaacgagaaactccatgcatccaagtggatgtccagcatcctgca
ctgactcctgtgttgagaccataccaaagagaggctgtaaattggatgctacaacaagag
catttcaaaagcacccctgctagtgaaaatgccctgcacttcctatggcgagaaattgtt
acatctgagggtttgaaactctactacaatccatatacaggctgcatcatccgtgagtac
ccaaatgctgggccacagttgcttggtggaatcttagcagatgagatgggtctgggaaag
acagtagaggttttggctctgattctgacacatactcgacaagatgtcaaacaagatgct
ctcactcttcctgagggaaaagtggtgaattatttcattccatcacataattctggagga
aatgtaaaaaacacagaaacccagaatatggaatttgaaccaaaagaaaaagttcagtgc
ccccctacacgtgtgatgatcctgacagctgttaaagaaatgaatggaaaaaaaggagtt
tccattctttccatctacaagtatgtcagttctatatatagatatgatgttcaacggaac
aggagtcttctgaaaaggatgctgaaatgtttaatttttgaaggtcttgtgaaacagatc
aaaggccacggtttttctggtacttttacactgggaaagaattacaaggaagaggatata
catgataaaacaaaaaagcaggttgtggggagtccaaggaaaattcagaaagaatccaga
aaaccagggagcaaggacacagattccgaatacttgccatcaaacacctctgatgatgat
gatgatccttactattattactgtaagcccaggagaaatcgtagtaaattgaggaaaaag
cctgttgttccatccacaaaaaaggaaaaaagtcagcttaacatcaatcttaactcacag
gatcactgtccagctactggtgactctgcagttactgatgttaccacatctgaaagtaca
tgtgtctttgaagtcaagcaaaaacatgcagcaaaggaccaagctgaatctctaaatcct
gttggtcatgacatgccacattctaatatcatgggtccctataattcctccgattatcac
tttgagtgcatatgtggtgaagttgaccaggtagaccgtaagcctcgtgttcagtgcctg
aaatgccacttgtggcagcatgcaaaatgtgtgaattatgaagagaagaatctgaagatt
aaacctttctactgcccccactgccttgttgcgatggagccagtatcaacaagagcaacg
ctgatcatctcccctagttccatctgtcatcagtgggtggatgaaatcaatagacatgtg
aggtcatcatctcttcgggtcttggtatatcaaggagtgaagaaagatggttttttacag
cctcattttttggcagaacaggatatagtcatcattacttatgatgtccttcgttcagaa
ctaaactatgtagatatcccacacagcaatagtgaggatgggcgtcgcttaaggaaccag
aagcgctatatggccattccgagcccccttgtagctgtggagtggtggaggatttgcctt
gatgaagctcagatggttgaatgtcctactgtaaaagctgcagaaatggctcagcgctta
agtgggattaaccgctggtgcatcagtggcactccagtacagagaggattggaggatctt
tttgggttagtggtctttcttggtattgaaccttactgtgtcaaacactggtgggttcga
cttctctatcgcccttactgcaagaagaatcctcagctcctgtacagctttattgccaag
atactgtggaggtctgcaaagaaagatgtgattgaccaaatccagataccccctcagaca
gaagaaatccactggctccacttttctccagtggaaagacatttctatcaccgtcaacat
gaagtgtgctgccaggatgcagtagtaaaactcaggaagatttctgactgggctttgaag
ctcagcagcctggacagaaggactgtcacctccatcctatatccattgctgaggctcagg
caggcctgctgccacccacaggctgttcgtggggagttcttgccactccagaaaagcacc
atgacaatggaggaactgctgacatctctgcagaagaaatgtggaactgaatgtgaagaa
gcacatcggcagctagtttgtgccctcaatggcttagcaggcatccacatcattaaagat
gagtatgccttggcagcagaactgtacagagaagtgctgcgttcatctgaggaacacaag
ggaaagctcaaaactgattcattgcaaagacttcatgctacccataacctgatggaattg
ttgatagccaagcacccagggatacctcctaccctgagagatggcagacttgaggaagag
gccaaacagctgcgagagcattatatgagcaagtgtaatacagaggttgctgaagcacaa
caagctttgctgccggtgcagcagaccgtacgtgacctccagagaaagatttattctaat
tctccttggtggctgaatgtgatacacagagcaatggaatttggtattgaagaggaactt
gttcaaagagtgcgaaatgaaataaccagcaactacaagcaacaaactggcaagctttct
atgtcagagaagttccatgactgcagaggtcttcagttcttacttacaacacatatggaa
gagctaagtaagttccagaagcaagtaagagacgctgtaaaaaatctggagggacctcca
tctcgtcatgttattgagtctgcaacaatctgccacctccggccaaccaggcttcctctc
aattgctgtgtcttttgtaaggctgatgaattgttcacagagtatgaatcgaagttattt
tctcacacagtcaaaggccagactgcaatatttgaggagatgatagaagatgaagaagga
ctggtggatgatcgaatacctaccaccaaccggggtctgtgggcaataagtgagacagag
cgatccatgaaagctctgctatcgtttgcaaaatcacatcgatttgatgttgaattcatt
gatgagggaagtacttcaatggatctctttgaagcttggaagaaagaatataagttgctt
catgaatattggatggctctgaggaatcgtgtgtctgctgttgatgagcttgcaatggct
acagaacgactaagagtacgtgatcctagggagccaaagcccagtccaccagttcctcat
atcattgaaccacatgaggtagaacaaaatcgtataaaactactaaacgataaagctgtt
gctacatcacagcttcagaaaaaactcgggcagcttctttacctaactaacttggagaag
tctcaggacaaaacatcaggaggtattaatccagaaccttgtccaatctgtgctcggcaa
ctgggaaaacagtgggcagtactgacctgtgggcactgtttctgtaatgaatgcatttca
attattatcgaacagtacagcgtggggtctcacaggagctccattaagtgtgccatctgc
cgccagaccacatctcataaagaaatctcgtatgtcttcacctcagagaaagccagccag
gaagaggacatccctgtgaagggcagccattctacaaaagtggaagctgtggtcagaact
ctgatgagaatccagctgagagatccaggggctaaagcacttgttttctcaacgtggcaa
gatgtattagacattatttcaaaagctctcactgataacaacatggaatttgcacagatc
agtcgtgttaagacatttcaggagaacctttcagcatttaaacatgatccccaaatcaat
attttgctgctgcccctgcacacaggttctaatggattaactatcatcgaagcaactcat
gttctcttggtggagcccatattgaaccctgcccatgagcttcaggccataggaagggtg
caccggattggacaaacaaaacccactattgtacacagattcttaattaaagcgacaata
gaagagagaatgcaagcgatgctgaaaaccgccgagaggagtcacacaagcccatcagcg
aaacattccgaggcctctgtcttgaccgtggctgatctggcagacctatttaccaaagaa
actgaagaccttgaatga
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