Lagenorhynchus albirostris (white-beaked dolphin): 132530836
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Entry
132530836 CDS
T10760
Symbol
AFDN
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb04014
Ras signaling pathway
lalb04015
Rap1 signaling pathway
lalb04024
cAMP signaling pathway
lalb04517
IgSF CAM signaling
lalb04519
Cadherin signaling
lalb04520
Adherens junction
lalb04530
Tight junction
lalb04670
Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
132530836 (AFDN)
04015 Rap1 signaling pathway
132530836 (AFDN)
04024 cAMP signaling pathway
132530836 (AFDN)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
132530836 (AFDN)
04519 Cadherin signaling
132530836 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
132530836 (AFDN)
04530 Tight junction
132530836 (AFDN)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
132530836 (AFDN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RA
AFDN
DIL
PDZ
FHA
PDZ_6
RA_2
RA_3
PDZ_2
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
132530836
NCBI-ProteinID:
XP_060024291
LinkDB
All DBs
Position
12:complement(1731263..1869797)
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AA seq
1780 aa
AA seq
DB search
MSAGGRDEERRKLADIIQHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCI
RVSSTATTQDVLETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDIDEKPLVVQLNWNK
DDREGRFVLKNENDAIPAKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEAMRQ
ASDRDDRPFHGDDTENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRS
SDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEALEKYGLEEENPKDYCVAR
VVLPPGAQHSDEKAAEEIILDDDECPLQIFREWPNDRGILVFQLKRRPPDYIPKKSQKHM
DGKPLHGKERVDGSGYGAALPPEKLPYLVELSPDGSDSRDKPKLYRLQLSVTEVGTEKFD
DGSIQLFGSGIEPHHCDLTNMDGVVTVTPRSMDAETYVDGQRISETTMLHSGMKVQFGVS
HVFKFVDPSQDHALPKRSMDGGLMAKGPRQRPGIVQETTFDLGGDVHSGTALPASKSSSR
LDGDRGLSAASTAERGMVKPMVRVEQQLDYRRQESRTQDAPGPDLILPASIEFRESSEDA
FLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSSQYRPDVSPAERTHKVIAIVNKMVSMM
EGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDVLAHLVQMAF
KYLVHCLQSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLF
SQLFHFINMWLFNRLVTDPESGLCSHYWGAIIRQQLGHVEAWAEKQGLELAADCHLSRIV
QATTLLTMDKYAPDDIPNINSTCFKLNSLQLQALLQNYHCAPDEPFVPTDLMERVAAVAE
NTADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNIPNGLQEFLDPLCQRGFCRL
IPHPRSPGTWTIYFEGADYESHLTRENTELAQPLRKEPEVITVTLKKQNGMGLSIVAAKG
AGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTL
EVAKQGAIYHGLATLLNQPSPMMQRISDRRGSGKPRPKSEGFELYNNSAQNGSPESPQMP
WAEYSEPKKLPGDDRLMKNRADHRSSPNVANEPPSPGGKGAYTSGTAAKITSVSTGNLCA
EEQTPPPRAEAYPIPTQTYTREYFTFPASKSQDRTAPPQDQWPRYEEKPHMHADSSHSST
AVQRVTRSQEELREDVAYHLERQRVEAAMERRSDGGDAWLNQGSSLGSSTSSQEHLGPPS
KAGTPASTLTKSGPGRWKTPAASPPVRTDPPPGHYGDGDGVPADSPLPPPPTGAQAAAER
KKREEQQRWYEKEKARLEEERERRRREQERRLGQLRAQAPPPGPPPPGPPSPAAPPAPAR
APDTVIRELQPQQQPRTIERRDLQYITVSREELASGDSLSPDPWKRDAREKLEKQQQLHI
VDLLSREIQELQGKAERSAEESDRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDDVDTVL
LMQRLEAERRARLQDEERRRQQQLEEIRTREAEQRARQEEQRARREAEEKRRQEEGYYSR
LEAERRRQHDEAERQLLAPEELGLGRPPLPRGYEPSAPAPPPPPQRAASHLQAQVLSPDA
LYTAKLVAYTEEDDDEDGGPAGPNSYVGSAGTLIGAHDVYRDPREKLSKSQDADVAGGPG
APENLTFRERQRLFSQGHDVSNKVKASRKLTELENELNTK
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgggcggccgcgacgaggagcggcggaagctggccgacatcatccagcactgg
aacgccaaccggctggacctgttcgagatcagccagcccaccgaggatttggagttccat
ggagtgatgagattttattttcaagataaagctgctgggaactttgcaacaaaatgtatc
cgggtctctagtaccgccaccactcaggacgtgctggaaacgctcgctgagaaattccgc
cctgacatgcggatgttgtcatcacccaagtactccctgtacgaagtgcatgtcagcgga
gaagaaagaagattggatatagacgagaaaccccttgttgtgcagttgaattggaataag
gatgatcgagagggcagatttgtccttaagaatgagaacgatgccattcctgctaagaag
gctcaaagtaacggacctgaaaagcaggaaaaagaaggtgttatccagaacttcaagaga
actctctcaaagaaagaaaagaaggaaaaaaagaagcgagaaaaagaggcaatgaggcag
gcgtctgatcgagacgatagacctttccatggggatgacaccgaaaattctcgactggct
gctgaggtttacaaagacatgcctgaaactagctttacccgaacgatttctaatcccgag
gtggttatgaaacgacggagacaacaaaaactggaaaagagaatgcaggaatttcggagc
tcagatgggcggcctgattcaggtggaacattgagaatttatgcagatagtttaaaacca
aatatcccctacaagacgatcctgctgtctaccacagaccctgcagacttcgctgtggct
gaagctctagagaagtacggtctggaggaagagaaccctaaggattattgcgtcgcccgc
gtggtgcttcctcctggggcccagcattctgatgagaaagctgctgaagaaatcatcctt
gatgacgacgagtgtcctctacagatcttcagggagtggccgaatgaccgagggatttta
gtctttcagctgaagaggaggccaccagactacatcccaaagaaaagccagaagcacatg
gatgggaagccgctgcacgggaaggagcgagttgatgggtctggctacggcgctgcactc
ccaccggagaaactgccctacctcgtagagctgagcccagatggttccgactccagagac
aagccaaagctctaccgccttcagctgagtgtcactgaggttgggacagagaagttcgac
gacggctccatccagttgtttggttcaggaattgaaccccatcactgtgacctcacaaac
atggatggagtggtcacggtcacgccgagaagcatggatgccgagacctacgtggacggg
cagcgcatctcggagacgacgatgctgcacagcgggatgaaggtgcagtttggggtgtcc
catgtgtttaagttcgtggaccccagccaggaccacgctctgcccaagagatccatggat
ggaggcctgatggcgaagggtcccagacagaggcctggaattgttcaggagacaactttt
gatttgggaggagatgttcatagtgggacagcattaccagcgagcaagagctcctccagg
ctggacggcgacagggggctgtctgccgccagcaccgccgagcgagggatggtgaagccc
atggtcagagtggaacagcagctggactaccgcaggcaagaaagcagaactcaggacgct
cctgggcctgacctaatactgcctgcaagcattgaattcagggaaagttctgaagatgca
tttttatctgccattataaattacactaatagctctacagtccattttaagttgtcacct
acatacgtgttatatatggcgtgtcggtatgtattgtccagccagtacagacccgatgtc
agtcccgcagaacggacgcacaaagtgattgccattgtcaacaagatggtgagcatgatg
gaaggggtcattcaggaagtagaccaggttgatcagaaacagaagaatattgcaggggcg
cttgctttctggatggcaaatgcatctgagctgctcaacttcataaagcaggaccgagat
ctgagtcgaatcacgctggatgcccaggatgttctagcacacttggttcagatggccttt
aaatacctggttcactgtcttcagtcagaactgaataattacatgccagcctttctggac
gaccccgaagagaacagtctgcagagacccaaaatagacgacgtgctgcacacgctcacg
ggggccatgtcgctgctgcgccgctgccgggtcaacgccgcgctgaccatccagctcttc
tcccagctcttccacttcatcaacatgtggctgttcaacaggctggtgaccgaccccgag
tcggggctgtgctcccactactggggcgccatcatccgccagcagctcgggcatgtggag
gcctgggcggagaagcagggcctggagctggcggccgactgccacctcagcaggatcgtg
caggcaaccactttgctcacgatggataagtacgcacccgatgacatcccaaatataaac
agtacctgcttcaagttaaattcgctgcagcttcaagccttacttcagaactaccactgt
gcacccgatgagccttttgtccctacagacctgatggagcgcgtggcggctgtggcggag
aacacagccgacgagctggcgcgcagtgacgggcgggaggtgcagctggaggaggacccc
gacctgcagctgccgttccttctgcccgaggacggctactcctgcgacgttgtcagaaac
atcccaaacggcttacaggagtttctggaccctttgtgccagagaggattttgcaggtta
attcctcacccgcgctcgccaggcacgtggacgatatattttgaaggtgcagattatgag
agtcaccttacgcgggagaacacggaactggctcagcctctgaggaaagaaccggaagta
atcacggtgaccctcaagaagcagaacgggatgggcctcagcattgtcgcggcaaagggt
gctggtcaagacaaacttggaatctacgtcaagtctgttgtaaaaggaggtgctgctgac
gtggacgggcggctggctgcaggtgaccagctcctcagcgtggatggacggagtctggta
ggactctctcaagaaagggcagcagaactgatgacaaggacaagctccgtggtgacgctg
gaagtagcaaagcaaggagccatttatcacggtctcgctaccctgctcaatcagccgtcg
cccatgatgcagagaatttcagatcgtcgtggatcaggtaaaccccgaccaaagagtgaa
ggttttgagctctataacaattcagctcaaaacgggtccccggagagccctcagatgcct
tgggcagaatacagcgaaccaaagaagctgcctggcgacgacaggctgatgaaaaacagg
gctgaccaccgctccagccccaacgtcgcaaatgagccccctagtcccggcgggaaaggc
gcctatacctctgggacagcggccaagataacgtccgtctccactggaaacctctgcgct
gaggagcagacccctcctccccgagccgaggcctaccccatcccgacgcagacctacacc
agggagtacttcaccttcccggcctccaagtcccaggaccgcacggctcctcctcaggac
cagtggccccgttacgaggagaagccccacatgcacgcggacagcagccactccagtact
gcagtccagcgcgtgacccggtcccaggaggagctccgggaggatgtcgcgtaccacctg
gagcggcagagggtggaggcggcgatggagcgcaggtctgacggcggcgacgcgtggctc
aaccagggctcctcgctgggctccagcacctccagccaggagcacctgggccccccttcc
aaggcgggcacccccgcgtccacgctcaccaagagcggccctgggcgctggaagacccca
gccgcctccccgccggtgcggaccgacccgccccccgggcactacggcgatggggacgga
gtccccgcggactcgcccctcccgccgcctcccaccggcgcccaggcggctgcagagcgg
aagaagcgggaggagcagcagcgctggtacgagaaggaaaaggcgcgcctggaggaggag
cgcgagcgccggcggcgggagcaagagcgcaggctgggccagcttcgggcgcaggcgccg
ccccccgggcccccgccccccgggccgccctcgcccgccgccccgccggcccccgcccgc
gccccggacaccgtcatccgggagctgcagccccagcagcagccgcgcaccattgagcgc
cgggacttgcagtacatcacggttagcagggaggagctggcctcgggggacagcctgtcc
cccgacccctggaagcgcgacgcgcgggagaagctggagaagcagcagcagctgcacatc
gtggacctgctgagccgcgagatccaggagctgcagggcaaggccgagcgctcggccgag
gagagcgaccgcctgcgcaagctcatgctggagtggcagttccagaagcggctgcaggag
tccaagcagaaggacgaggacgacgaggaggaggaggacgacgacgtggacaccgtgctg
ctcatgcagcgcctggaggccgagcgcagagcgcggttgcaggacgaggagcggcggcgg
cagcagcagctggaggagatacggacccgggaggctgagcagcgggcccggcaggaggag
cagcgggccaggcgcgaggccgaagaaaagaggcgacaggaggaggggtactacagccgc
ctggaggccgagcggcgccgacagcacgacgaggccgagcgccagctgctggcgcctgag
gagctgggcctgggccgccctccgctcccgcggggctacgagccctcggcccccgcgccc
ccgccgccgccccagcgcgccgcctcccacctgcaggcgcaggtgctctcccccgacgcc
ctgtacaccgccaagctcgtggcttacaccgaggaggacgacgacgaggacggcggcccg
gcaggaccaaactcttacgtgggatctgctggaacactgatcggggcccatgacgtttat
cgcgatccgagagagaaactgtctaaaagccaagacgcagatgtagctgggggtcctgga
gcccctgaaaacctgacgttcagagagcgccagcgcctcttctcccaaggccacgacgtc
tccaacaaagtgaaagcctctcgcaaattaacggagctggagaacgagctgaacacgaag
tga
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