Lagenorhynchus albirostris (white-beaked dolphin): 132530864
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Entry
132530864 CDS
T10760
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03082
ATP-dependent chromatin remodeling
lalb04714
Thermogenesis
lalb05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132530864 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
132530864 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
132530864 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lalb03000
]
132530864 (ARID1B)
03021 Transcription machinery [BR:
lalb03021
]
132530864 (ARID1B)
03036 Chromosome and associated proteins [BR:
lalb03036
]
132530864 (ARID1B)
Transcription factors [BR:
lalb03000
]
Eukaryotic type
Helix-turn-helix
ARID
132530864 (ARID1B)
Transcription machinery [BR:
lalb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132530864 (ARID1B)
Chromosome and associated proteins [BR:
lalb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132530864 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
132530864
NCBI-ProteinID:
XP_060024339
LinkDB
All DBs
Position
12:complement(9913194..10324294)
Genome browser
AA seq
2419 aa
AA seq
DB search
MAARAAAAAAAARARAGSGERRAPPGPRPAPGARDLEAGARGAAAAAAAPGPMPGGGGDG
SGLNNVHHHPPHPRHELNMAHNASAAAAAASANSAKSGGSEAALKEGGSAAALSSSSSSA
AASSSSSSAGPGSAMETGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHLHHHAHHLHRHH
HALQQQLSQFQQQQQQRQQHPISNNSLSGAGSGTAQPGPDMEQPQHGGAKDSAGGSQAEP
PGQPLLSKPGDEDDAPPKMGEPAGGRYEQPGLGALGAQQQPVAVPGGGGGVGGGGVGGGV
GGPAAVSEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAGAPNSMDP
LQNSHEGYPNSQYNHYPGYSRPSAGGGGGGGGGGGGGGGGSGGGGGGGGGAGAGAVAAAA
AAAAAAAAGGGGGGGGYGGSSSGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGAAAGG
FQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPDYSSPSAPPPPPPSQPQSQAAAA
GAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDP
MVMKRPQLYGMGSNPHSQPQQSSPYPAGSYGPPGPQRYPIGIQGRTPGAMGGMQYPQQQV
PPQYGQPGVSGYCQQGQQPYYSQQPQAQYLPSQPQQRYQPQQDMSQEGYGTRSQPPLAPG
KPNHEDLNLIQQERPSSLPVEVLTSEDTAFGLKDLSGSIDDLPTGTEATLSSAVSASGST
SSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPP
QPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMSQYGPQQTGPSMSPHPSPGGQMHP
GISSFQQSNSSGTYGPQMSQYGPQGNYSRPPTYSGVPSASYSGPGPGMGINANSQMHGQG
PSQPCGAMPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAA
AAVMQAAANSAQSRPPYIRSPAYPSQSGAGGRPMFSSQHPNYGNSQAPMMNQPDQYGQGG
FPGVNQSGLMASSSPYSQPMSNSSGLMNTQAPPYSMTPNMVNSSTASMGLADMMSPGESK
LSLPLKADGKEEGTAQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDES
DSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSL
PAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLF
AFECKTERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDL
KPPTPASTPHGQITPMQGGRSSTVSVHDPFSDASDSSFPKRNSMTPSAPYQQGMSMPEVM
GRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMAASSMQDMYNQSPSGAMSSLGMGQRQPFP
YGASYDRRHEPYGQQYPGQGPPSGQPAYGGHQPGLYPQQTNYKRHMDGVYGPPAKRHEGD
MYNMQYGNQQQEMYNQYGSSYSGPDRRPIQGQYPYPYTRERMQGPGQIQAHGIPPQMMGG
PMQSSSSEGPQQSMWATRNDMPYPYQSRQGPGGPAQTPPYPGMNRTDDMMVPDQRINHES
QWPSHVSQRQPYMSSSASMQPITRPPQSSYQTPPSLPNHISRAPSPASFQRSLESRMSPS
KSPFLPSMKMQKVMPTVPTAQVTGPAPQPPPVRREITFPPGSVEASQPVLKQRRKITSKD
IVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKC
LIDIFGILMEYEVGDPSQKALDHNVVKRDDSQSLADDSGKEEEDAECIDEEEDEEEDEEE
DGGKAETEDRSSMALASPDATADPKEKPRQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQ
EFSSGLLHWQLGGGDTTEHIQTHFESKTEIPPRRRPPLPLSATGRKKEQEGKGDPEEQQE
KSIIATIDDVLSARPGALPEDANPGTQTESSKFPFGIHQAKSHRNIKLLEDEPRSRDEAP
LCTVAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKR
APQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILD
GLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEK
FYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLEDGVTMA
QYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAV
LNSLVASVICDVLFQIGQL
NT seq
7260 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgggcagcagcggcggcggcggcggcgcgggcgcgggctggcagcggcgag
cggcgggcgccccccgggccgcggccggcgcccggggcccgggacctagaggcgggggcg
cgcggcgcggcggcggcggcggcggcaccgggacccatgccggggggcggcggcgacggc
agcggcctgaataacgtgcaccaccaccccccgcacccccgtcacgaactgaacatggcc
cataacgcgagcgcggcggcagccgccgccagcgctaacagcgccaagagcggcggctcc
gaggcggctctcaaggagggtggaagcgccgccgcgctgtcctcctcctcctcctccgcg
gcggcgtcctcctcttcctcctcggcgggcccgggctcggccatggagacggggctgctc
cccaaccacaaactgaaaaccgttggcgaagcccccgccgcaccgccccaccagcagcac
caccaccaccaccatgcccaccacctgcaccaccatgcccaccacctccaccgccaccac
cacgcactacaacagcagctaagccagttccagcagcagcagcagcagcggcagcagcat
cccatttccaacaacagtctcagcggcgcgggcagtggcacggctcagcccggtcccgac
atggagcaaccgcaacatggaggggccaaggacagtgccgggggcagccaggccgagccc
ccgggccagcctctgctgagcaagccgggcgacgaggacgacgcgccgcccaagatgggg
gagccggcgggcggccgctacgagcagccgggcctgggcgccctgggcgcgcagcagcag
ccggtcgccgtgcccgggggcggcggcggcgtcggcggcggcggcgtcggcggcggcgtc
ggcggcccggcggccgtctcggagtttaataattactatggcagcgctgccccagctagc
ggcggccccggcggccgcgctgggccttgctttgatcaacatggcggacaacaaagcccc
gggatggggatgatgcactccgcctcagctgccgccggagcccccaacagcatggacccc
ctgcagaactcccacgaagggtaccccaacagccagtacaaccattatccgggctacagc
cggcccagcgcgggcggcggcggcggcggcggcggcggcggaggaggaggaggaggaggc
agcggaggaggaggaggaggaggaggaggagcaggagcgggagctgtggcggcggcggcc
gcggcggcggcggcagcagcagcaggaggcggcggcggcggcggcggctatgggggctcg
tcctcggggtacggggtgctgagctccccccggcagcagggcggcggcatgatgatgggc
cccgggggcggcggggccgcaagcctcagcaaggcggccgccggcgcggcggcggggggc
ttccagcgcttcgccgggcagaaccagcacccgtcgggggccactccgaccctcaaccag
ctgctcacctcgcccagccccatgatgaggagctacggcggcagctacccggactacagc
agccccagcgcgccgccgccgccgccgccgtcgcagccccagtcccaggcggcggcggcg
ggggcggcggcgggcggccagcaggcggccgcgggcatgggcttgggcaaggacatgggc
gcccagtacgccgctgccagcccggcctgggcggccgcgcaacaaaggagccacccggcg
atgagccccggcacccccggcccgaccatgggcagatcccagggcagcccaatggatccc
atggtgatgaagagacctcagctgtatgggatgggcagtaaccctcattctcagccacag
cagagcagcccttacccggcaggttcctacggccccccaggcccacagcggtatccgatt
ggcattcaaggtcggaccccaggggccatgggaggaatgcagtacccacagcagcaggtg
ccgcctcagtatggccagccaggtgtgagcggttactgccagcagggccagcagccttac
tacagccagcagccgcaggcgcagtatctgccgtcccagccccagcagaggtaccagccg
cagcaggatatgtctcaggaaggctatggaactaggtctcaacctcctctggctcctgga
aaacccaaccatgaagacttgaacttaatacaacaagaaagaccatcaagtttaccagtt
gaagtcttgacctcggaggatactgcctttggactcaaggacctgtctggctccattgat
gacctccccacgggaacggaagcaactttgagctcagcagtcagtgcatccgggtccaca
agcagccaaggggatcagagcaacccagctcagtcgcctttctctccacacgcatctccc
catctctccagcatccctgggggcccatcgccttctcctgtcggctctcctgtaggaagc
aaccagtcacgatctggcccaatttctcctgcaagtattccaggcagtcagatgcctcct
cagccacctgggagccagtcagaatccagttctcatcctgccttgagccagtcaccaatg
ccacaggaaagaggttttatggcaggcacacaaagaaaccctcagatgtctcaatatgga
cctcaacagacaggaccatccatgtcgcctcatccttctcctggaggccagatgcatcct
ggaatcagtagctttcagcagagtaactcaagtgggacttacggtccacagatgagccag
tatggaccacaaggtaactactccagacccccaacatatagtggggtgcccagtgcaagc
tacagcggcccagggcccggcatgggcatcaatgccaacagccagatgcatggacaaggg
ccaagccagccgtgtggtgctatgcccctgggacgaatgccatcagctgggatgcagaac
agaccctttcctggaaatatgagcagcatgacccctagttctcctggcatgtctcagcag
ggagggccaggaatggggccaccaatgccaaccgtgaaccgtaaggcacaggaggcagct
gccgcagtgatgcaggccgctgcgaactcggcacaaagcaggccaccatacattaggtcg
cctgcttatcccagccagtctggggctggcggacgccccatgttttcttcccagcacccc
aactatggcaactctcaggctcccatgatgaaccagcctgaccagtacgggcaaggcggc
tttcccggcgtgaatcagagcggactcatggcttccagctctccctacagccagcccatg
agcaacagctctgggctgatgaacacccaggcgcccccctacagcatgacgcccaatatg
gtgaacagctcaacagcatctatgggtcttgcagatatgatgtctcctggtgaatccaaa
ctgtccctgcctctcaaagcagatggtaaagaagaaggcactgcacagccggagagcaag
tcgaaggatagctacagctctcagggtatttctcagcccccaacccccggcaacctgcca
gtcccttccccaatgtcccccagctctgctagcatctcctcatttcatggagatgaaagt
gatagcattagcagcccaggctggccaaagactccatcaagccctaagtccagctcatcc
accaccactggcgaaaagatcacaaaggtgtatgaattggggaatgagccagagagaaag
ctgtgggtagaccgatacctcaccttcatggaggagagaggctccccggtctcaagtctg
cctgcggtgggcaagaagcccttggacctgttccgactctatgtctgcgttaaagagatt
ggaggtttggcacaggttaataaaaacaagaagtggcgcgagctggcaaccaacctaaat
gtcggcacttcaagcagtgcagcgagctccctgaaaaagcagtatattcagtacctgttt
gcctttgagtgcaagactgagcgaggggaggagcccccgccggaagtcttcagcacggga
gacaccaagaagcagcccaagctccagccgccctctcctgctaactcaggatccttgcaa
ggtccacagactccccagtcaactggcagtaattccatggcagaggttccaggtgacctg
aagccgcctactccggcctccacccctcacggacagattaccccaatgcaaggtggaaga
agcagtacagtcagtgtgcacgacccattctcagacgcaagtgattcatcattcccaaaa
cgcaactccatgactccgagcgccccataccagcagggcatgagcatgccggaagtgatg
ggcaggatgccctacgagcccaacaaggacccctttggaggaatgagaaaagtgcctgga
agtagcgagccgtttatgacgcaaggacagatggccgccagcagcatgcaggacatgtac
aaccagagcccgtctggagcgatgtccagtctaggcatggggcagcggcagccgtttccc
tatggagccagttacgatcgaaggcatgaaccttacgggcaacagtacccaggccaaggc
cctccctcaggacagccagcatatggaggacaccagccgggcctgtatccacagcagacg
aattacaagcgccatatggatggcgtgtatgggcctccagccaaacgccacgagggagac
atgtacaacatgcagtacggcaaccagcagcaagagatgtataaccagtacggaagttcc
tactccggacccgacaggaggcccatccagggacagtacccgtacccctacaccagggag
aggatgcaaggcccggggcagatacaggcgcacgggatcccaccccagatgatgggcggc
ccaatgcagtcgtcttccagcgaagggcctcagcagagtatgtgggcgacacgcaacgat
atgccttatccctaccagagcaggcaaggccccggcggccctgcacagacacctccttac
ccaggcatgaaccgcacggacgacatgatggtacctgatcaaaggataaaccacgagagc
cagtggccttctcacgtcagccagcgtcagccttacatgtcctcttcagcctccatgcag
cccatcacgcgcccgcctcagtcatcctaccagacgccaccatcgctgccaaatcatatc
tccagggcgcccagccccgcctccttccagcgctccctggagagccgcatgtctcccagc
aagtcccccttcctcccctccatgaagatgcagaaggtcatgcccaccgtccccacggcc
caggtcacggggccggccccccagccgcccccagtcagaagggagatcacctttcctcct
ggctctgtggaagcgtcacagcccgtcttgaaacaaaggcggaagattacctcaaaagat
attgttactcctgaggcctggcgtgtgatgatgtccctcaagtcaggtcttctggctgaa
agtacttgggctttggacactattaatattcttctatatgatgacagcactgtcgctact
ttcaatctctcccagttgtccggatttctcgaacttttagtagagtactttaggaaatgc
ctgattgacatttttgggattcttatggaatatgaagtgggagaccccagccaaaaagca
cttgatcacaatgtggtaaagagagatgacagccagtccttggccgacgattctgggaaa
gaggaagaagatgccgaatgtattgatgaggaggaagatgaggaggaagacgaggaggaa
gacggtgggaaggcggagactgaggacaggagcagcatggccttggcctcccccgatgcc
accgcggatccaaaggagaagcccaggcaagccagtaagttcgacaagctgccaataaag
atagtcaaaaagaacaacctgtttgtcgtcgaccggtctgacaagctgggccgtgttcag
gagttcagcagtggacttctgcactggcagctcggtggcggggacaccaccgagcacatc
cagactcactttgagagcaagacggaaattcctcctcgcaggcgtccacctctcccttta
agcgccacaggtagaaagaaagagcaagaaggcaaaggggaccctgaagagcagcaagag
aagagcatcattgcaaccattgatgacgtcctgtctgctcggccaggggctcttcctgaa
gacgcaaaccctggtacccaaaccgaaagcagtaagtttccctttggaatccatcaagcc
aaaagtcaccgcaatatcaagctgctggaggacgagccgcggagccgggacgaggctccg
ctctgcaccgtcgcgcactggcaggactcgctggctaagcgctgcatctgcgtgtccaat
atcgtccggagcttgtcttttgtgcctgggaacgacgctgaaatgtccaaacatccaggc
ttggtgctgatcctggggaagctgattcttcttcaccacgagcatcccgagagaaaacga
gcgccgcagacctacgagaaggaggaagacgaggacaaaggggtggcctgcagcaaagat
gagtggtggtgggactgcctcgaggtcttaagggataacacgttggtcaccttggccaac
atttctgggcagctagacttgtctgcttacacggaaagcatctgcttgccaatattggat
ggcttgctgcactggatggtgtgcccgtcagcagaggcacaagacccctttcccactgtg
ggacccaactctgtcctgtcgcctcagagacttgtgctggagacgctctgtaaactcagc
atccaggacaacaatgtggacctgatcttggctacgcctccatttagtcgtcaggagaaa
ttctatgccacgttagttaggtacgttggggatcgcaaaaacccagtctgtcgagaaatg
tccatggcgcttttatcgaaccttgcccaaggggacgcgctggctgcaagggcaatagct
gtgcagaaaggaagcatcgggaacttgataagcttcctagaggatggggtcacgatggcc
cagtatcagcagagccagcataacctcatgcacatgcagcccccgcctctagagccccct
agcgtggacatgatgtgcagggcggccaaggctctgctggccatggccagagtggacgag
aaccgctcagagttccttctgcacgagggtcgattgctggatatctcgatatcagccgtc
ctgaactctctggttgcgtctgtcatctgtgatgtactgtttcagattgggcagttatga
DBGET
integrated database retrieval system
