Lagenorhynchus albirostris (white-beaked dolphin): 132531074
Help
Entry
132531074 CDS
T10760
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
132531074 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lalb03021
]
132531074 (POLR1A)
Enzymes [BR:
lalb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
132531074 (POLR1A)
Transcription machinery [BR:
lalb03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
132531074 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
DUF7736
Motif
Other DBs
NCBI-GeneID:
132531074
NCBI-ProteinID:
XP_060024596
LinkDB
All DBs
Position
13:13911993..13988168
Genome browser
AA seq
1718 aa
AA seq
DB search
MLGSKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGPADS
KEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFEKLYLLLRGSCLNCHMLTCPRAVIHLL
LCQLRVLEVGALQSVYELERIQYRFLEENADPTAFEIQEELERYTTKILQNNLLGAHGAR
VKNVCESRSKLIAFFWKAHMTAKRCPHCKTGRSVVRKEHNSKLTITYPAMVHRKADQKDT
EPPGIEEAQMGKRGYLTPTSAQEHLTALWNNEGFFLNYLFLGLEDVGMESRFNPSMFFLD
FLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQELPREVAAPAA
DEEKDPSIAMDRSFLSLLPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQI
LEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPSVHPGASMVINEDGSRTALSASNLTQREAVAKQLLTPAMGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFSREQYMELVYRG
LTDRVGRVKLFPPAILKPCPLWTGKQVVSTLLINIIPEDHVPLNLSGKAKIGGKAWVKES
PRPVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVRRHRIIEESTHCGPRAVRAALNLPEAASCD
EVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPLGLHRQFPENNLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLASNCEVIMKSKHLHEVLSRADPQKALRHFKAIKKWQSKHS
NALLRKGAFLNYSQKIQAAVKALNLEGANQNGRSPETHQMLRMWAELDEQSRRKYQKKAS
PCPDPSLSVWRPDIYFASVSETFEKKVDDYSREWAAHAERSYEKSELSLDRLRTLLQLKW
QRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMRVPVFNTKKALKKVKSLKKQLTRVCLGEVLEKIDVQESFSMGEKQNKFRVYELRFQ
FLPHAYYQQEKCLRPGDILHFMETRFFKILMESIRKKNSKASAFRSVNTRRATQRDLDNE
GESERSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEDEEDGEDGED
LQEEGTVLGEGTPRARAQAQEEEGGSGPEEDSLPAAPLAQPWKPTRSREPQDAEAVERRV
QAVRECHPFIEDYQYDTQDGLWCQVMVKLPLIKVNFDMSSLVVSLAQGAVVYATKGITRC
LLNETTNSKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMASTYGIEAALRVIE
KEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLK
QATMMGSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctcaaagaacatgccctggcggcggctgcagggcatttctttcgggatgtat
tcggccgaagagctcaagaaattaagcgttaagtccattacaaaccctcggtacctggat
agcctggggaacccgtcggtgaacggcctgtacgatctagctctgggccccgcagactcc
aaagaggtgtgctccacctgcgtgcaggacttcagcaactgctccgggcacctgggccac
atcgagctcccgctcactgtgtacaaccctctcctcttcgagaaactctacctgctgctc
cggggttcctgtttaaactgtcacatgctgacttgcccccgggctgtgattcacctgctg
ctctgccagctgagagttctggaagtcggggccctacaatcagtgtacgagctggagaga
attcagtacaggtttctggaagaaaatgctgatcctactgccttcgaaattcaggaagag
ttagaacgatatacaaccaaaatcctacagaacaacctcctgggagcccatggcgcacgt
gtaaaaaatgtctgtgagagcagaagcaaacttattgctttcttctggaaggcacatatg
actgctaagcgatgtccccactgcaaaaccgggcggtcagttgtccgaaaggagcacaac
agcaaactgacaatcacgtatccggccatggtgcacaggaaagctgaccagaaggacact
gagcccccgggaattgaggaagctcagatgggaaagcgaggatacttgacacccaccagc
gctcaagaacatctcacggctctttggaataatgaaggattctttctgaattaccttttt
ctgggactggaagatgttggcatggagtccagattcaatcccagtatgttctttctggat
ttcttggtggtgccgccctcaaggtatcgccctgtcagccgcctcggggaccagatgttc
accaacggccagacggtgaacctgcaggctgtcatgaaggatgtggttctgatccgaaag
cttctggccttgatggcccaagaacaggagctgccaagagaggtggcagcacccgccgca
gatgaggaaaaagacccttcgatcgctatggaccggtcctttctgagtctacttccaggc
cagtccctcacagacaaactttacaacatttggattcgccttcagagccacgtcaatatt
gtgtttgatagtgagatggacaaattaatgatggagaagtaccctggcattagacagatc
ctggagaagaaggatggtttattccggaagcacatgatgggaaagcgagtagactatgca
gcccgctcagtcatctgcccggacatgtacatcaacaccaatgaaattggaattcccatg
gtgtttgccacaaagctgacctaccctcagccagtcaccccctggaacgttcaggaactg
aggcaggcggtcatcaacggccccagtgtgcacccaggagcctccatggtcatcaacgag
gatggcagccgcacggccctgagtgcctcgaacctaacccagcgggaggccgtggccaaa
cagctcctgacgccagccatgggggcacctaagccccaggggacaaaaattgtatgccgg
cacgtgaagaatggggacattctcctcctgaaccgacagcccaccctgcacaggccctcc
atccaggcgcatcgcgcccgcatcctgcccgaggagaaagtcctgcggctccactatgcc
aactgcaaggcctacaacgccgactttgatggagacgagatgaacgcccacttccctcag
agtgaactgggccgggccgaggcctacgtcctggcctgcacggatcagcagtacctcgtt
cccaaggatggccagccattggcagggctgatccaagatcacatggtttcgggtgcaaac
atgaccattcgaggctgctttttcagccgggagcagtatatggagctggtgtaccgagga
ctcacagacagagtggggcgtgtgaagctctttcctcctgccatcctgaagccctgtccg
ctgtggacaggaaagcaggttgtgtccacgctgctcatcaacataatcccagaggatcac
gtcccactgaacttgtcaggaaaggcgaagattggtgggaaggcctgggtgaaggagtct
cctcggcccgttcccggctttaaccccgactccatgtgcgagtcccaggtgatcatcagg
gaaggggagctgctctgcggggtgctggacaaggcgcattatgggagctccgcctacggc
ctggtccactgctgctacgagatctacggcggggagaccagcggcaaggttctcacctgc
ctggcccgcctcttcaccgcctacctgcagctctacagaggcttcactttgggcgtggaa
gacattctggtcaagccgaaggcagacgtcaggagacacaggatcattgaagagtccacc
cactgtgggccccgggctgtcagggctgcgttaaaccttccagaagcggcatcgtgtgat
gaggtccgagggaagtggcaggatgcccatctgggcaaagaccagagggattttaacatg
attgatctgaagttcaaggaggaagtgaatcattacagcaatgaaattaacaaggcatgc
atgcctttgggcctgcacagacagttcccagagaacaacttgcagatgatggtgcagtct
ggagccaaaggttcaactgtgaataccatgcagatctcgtgcctgctgggccagatcgaa
ctggaaggccggagacccccgctgatggcatctggcaagtcactgccctgcttcgagccg
tatgagttcacccccagggctggcggcttcgtcactggcagattcctcaccggcatcaag
cctcctgagttcttcttccactgcatggccgggcgagagggtctggtggacacggctgtg
aagaccagccgctccggctacctccaaaggtgcatcatcaagcacctggaggggctggtc
gtccagtatgacctgacagtccgcgacagcgacggcagcgtggtgcagttcctgtatggg
gaggacggcctggacatccccaagacacagttcctgcagcccaagcagttccccttcctc
gccagcaactgtgaggtgataatgaaatcgaagcacctccacgaagttttatccagagca
gatccccagaaagctctccgccacttcaaagccatcaaaaaatggcaaagcaagcattcc
aacgccctgctgagaaaaggcgccttcttgaattattcccagaaaattcaagcagctgtg
aaagccttgaacctcgagggcgcaaaccagaacggccgcagccccgagactcaccagatg
ttgaggatgtgggctgagttagatgagcaaagccggaggaaataccagaagaaggcgtct
ccttgtcccgaccccagtctgtctgtctggcgcccagacatctactttgcatcagtgtcg
gaaacatttgaaaagaaggtggatgactacagtcgcgagtgggcagctcacgcagagagg
agttacgagaaatcggagctctctctggacaggttgaggactcttctgcagctgaagtgg
cagcgctcgctgtgtgacccgggagaggccgtgggcctgttggccgcacagagcatcggg
gagccctccacacagatgaccctgaacaccttccactttgccggcagaggcgagatgaat
gtcaccctgggcattcccaggttgagggagattctcatggtggccagcgccaacatcaag
acgcccatgatgcgcgtgcctgtgttcaacaccaagaaggctctgaaaaaagtgaaaagc
ctgaagaagcagctcaccagggtgtgcctcggggaggtgttggagaaaattgatgtccag
gagtccttctctatgggggagaaacagaacaagttccgggtgtacgagctgcggtttcag
ttcctgccacacgcgtactaccagcaggaaaagtgcctgagacccggggacatcctgcat
ttcatggaaacaagattctttaaaattctgatggaatccatcagaaagaagaatagtaaa
gcatcagctttcagaagcgtaaacacgcggagagctacccagcgggatctagacaacgaa
ggcgagtcggagaggagtcggggagagcaggaaggcgacgaggaagaggaggggcacatc
gtggacgccgaagctgaggagggagacgctgatgcctcggacgccaaacgcaaggagaaa
caagaggaggaggttgactacgagagtgaggacgaggaggatggcgaggacggcgaggac
ctgcaggaggaagggaccgtcctcggggaaggcactccccgggcccgggcccaggcgcag
gaggaggaggggggctcaggccccgaggaggactcgctccctgccgccccactggcgcag
ccgtggaagcccacccgcagccgggagccccaggacgccgaggcggtggagcgccgcgtg
caggccgtgcgcgagtgccacccgttcatcgaggactaccagtacgacacccaggacggc
ctgtggtgccaggtgatggtgaaactccctctcatcaaggtcaactttgacatgagctcc
ctggtagtgtccctggcccaaggcgccgtcgtctacgcaaccaagggcatcacgaggtgc
ctcctgaacgaaaccaccaacagtaagaacgagaaggagctcgtcttaaacacagaaggc
atcaacctcccggagctgttcaagtacgccgaggtcctggatttgcgtcgcctctattcc
aatgacatccatgccatggccagcacgtacggcatcgaggccgcgctgcgggtgatcgag
aaggagatcaaggatgtgttcgccgtgtacggcatcgccgttgacccccgccacctctcc
ctggtcgctgactacatgtgcttcgagggtgtttacaaaccgctgaaccgctttgggatc
cggtcgaactcctccccactgcagcagatgacgtttgagaccagcttccagtttctgaag
caggccaccatgatgggatcccacgatgagctgaggtcgccgtcagcctgcctcgtggtt
gggaaggtcgtcaagggcgggacaggcctcttcgagctcaagcagcccctgagatag
DBGET
integrated database retrieval system
