Lagenorhynchus albirostris (white-beaked dolphin): 132531849
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Entry
132531849 CDS
T10760
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb01524
Platinum drug resistance
lalb03430
Mismatch repair
lalb05200
Pathways in cancer
lalb05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
132531849 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
132531849 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
132531849 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
132531849 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lalb03400
]
132531849 (MSH6)
DNA repair and recombination proteins [BR:
lalb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
132531849 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
WPP
Motif
Other DBs
NCBI-GeneID:
132531849
NCBI-ProteinID:
XP_060025957
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Position
13:complement(50450842..50468897)
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AA seq
1361 aa
AA seq
DB search
MSRQSTLYSFFPKSPALNNASKDPVRASSESAAAAATGASPPSPGGDAAWSEAGPGPGPL
AGSTSRAEARNLNGGLRKSAAPAVPASSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTF
IREKGKSARVHVQFFDDSPTRGWVSRRLLKPYTGSKSKEAQKGGHFYSSKPEILRAMQRA
DEALNKDKIKRLELAVCDEPSEPEEEEETEAGATYASDKSEEENEIESEEEVRPKVQGSR
RSSRQIKKRRVISDSESDIGGSDVEFKPDAKEEGSSDEISSGVGDSDSEGLDSPVKVAPK
RKRMITGNGSLKRKSSRKEMPSATKRATGISSETKNTLSAFSAPQNSESQAHVSGGCDDS
SRPTIWYHETLEWLKEEKRRDKHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQ
NFDLVIFYKVGKFYELYHMDALTGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYK
VARVEQTETPEMMEARCRKMAHISKYDRVVRREICRVITKGTQTYSVLEGDPSENYSKYL
LSLKEKEEDSYGHARVYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKG
NLSVETKMILKGSLSSSLQEGLIPGSQFWDAAKTLRTLLEEGYFTDKLNEDSGVMLPQVL
KGMTSESDSVGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVRA
TGPGAVFAKASQRMVLDAVTLSNLEIFLNGTDGSTEGTLLDKIDTCYTPFGKRLLKQWLC
APLCNPYVISDRLDAIEDLMVVPDKISEVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPD
SRAIMYEETTYSKKKIIDFLSALEGFKVLCKIIGVMEEVIDDFKSKILKQVLTLQAKNPE
GRFPDLTLELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQR
SRIGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLI
NAEERRDVSLKDCMRRLFYNFDKNYKDWQAAVECIAVLDVLLCLANYSRGGDGPMCRPVI
LLPGEDTPPFLDLKGSRHPCITKTFFGDDFIPNDILIGCEEEEENGKAYCVLVTGPNMGG
KSTLMRQAGLLVVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETAS
ILKHATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQN
VAVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRK
AREFEKMTQSLRLFREVCLASESSTVDAEAVRKLLTLIEEL
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacaaagcacgctgtacagcttcttccccaagtctccagccctgaataatgcc
agcaaagacccggtcagggcctcaagtgaaagcgccgccgccgctgccaccggggcctct
cccccttccccaggcggggatgcggcctggagcgaggccgggcctgggccggggcccctg
gcgggctccacttcgcgggccgaggcgaggaacctcaacggaggcctgcggaagtcggca
gcccctgcggtccccgccagttcttgtgacttctcaccaggtgatttggtttgggccaag
atggagggttacccttggtggccttgcctggtttacaaccacccttttgatggaacattc
atccgtgagaaaggaaagtctgcccgagttcatgtacagttttttgatgacagcccaacg
aggggctgggttagcagaaggctattaaagccatatacaggttcgaagtcaaaggaagcc
cagaaaggaggtcatttctacagttcaaagcctgaaattctcagagcaatgcaacgtgca
gatgaagccttgaataaagacaagattaagaggcttgaattggcagtgtgtgatgagccc
tcagaaccagaggaggaagaagagacagaggcaggtgccacttacgcatcagataagagt
gaagaagaaaatgaaattgagagtgaagaggaagtgaggccaaaggtgcaaggatctagg
cgaagtagccgccagataaaaaagcgaagggtcatatcagactctgagagtgacattggt
ggctctgatgtggaatttaagccagatgctaaggaggaaggaagcagtgatgaaataagc
agtggagtaggggatagtgacagtgaaggcctggacagccctgttaaagttgctccaaag
aggaagagaatgataactggtaatggctccctcaaaaggaaaagttcaaggaaggaaatg
ccctcagccaccaaacgagcaactggcatttcatcagaaaccaagaatactttgagtgct
ttctctgcccctcaaaattctgaatcccaagcccacgttagtggaggatgtgatgacagt
agtcgccctaccatctggtatcatgaaactttagagtggcttaaggaggagaagagaaga
gataagcacaggaggcgacctgatcaccctgattttgatgcatccacactctatgtgcct
gaggatttccttaattcctgtactcctgggatgagaaagtggtggcagattaagtctcag
aactttgatcttgtcatattttataaggtggggaagttttatgagctataccacatggat
gctcttactggagtcagtgaactagggctggtattcatgaaaggcaactgggcccattct
ggtttccctgaaattgcatttggccgatattcagattccctggtccagaagggctataaa
gtagcacgggtggaacagaccgagaccccggaaatgatggaggcacgatgccgaaagatg
gcacatatatctaagtatgacagagtggtgaggagggagatctgtagggtcattaccaag
ggtacacagacctacagtgtgctggaaggtgacccctcagagaactacagtaaatacctt
cttagcctcaaagaaaaagaagaagattcttatggccacgctcgagtgtatggagtatgt
tttgttgatacctcgctagggaagttcttcataggtcagttttcagatgatcgccattgt
tccaggtttaggacgttagtggcacactatcctccagtacaagtcttgtttgagaaagga
aatctctcagtggaaactaagatgattctcaagggttcattgtcctcttctcttcaggaa
ggtctaataccaggttcccagttttgggatgcagccaaaactttgagaactctccttgaa
gaaggatattttacggacaagttaaatgaggacagtggggtgatgttaccccaggtgctt
aaaggtatgacctcagagtctgattctgttgggttgacaccgggagagaagagtgaattg
gccctctctgctcttggtggttgtgtcttctacctcaaaaaatgccttattgatcaggag
cttctatcaatggctaattttgaagaatatattcccttggattctgacacggtccgtgct
acaggacctggtgctgtctttgctaaagccagtcaacgaatggtgctagatgctgtgaca
ttaagcaacttggagatttttctgaatggaacagatggttctactgaagggaccctgtta
gacaagattgatacttgctatactcccttcggtaagcggctcctaaagcaatggctttgt
gccccactctgtaacccttatgttatcagtgatcgtctagatgccatagaagacctaatg
gttgtgcctgacaaaatctctgaggttgtagaccttctaaagaagcttccagaccttgag
aggctactgagtaaaattcataatgttggctctcccctgaagagccagaaccacccagat
agcagggctataatgtatgaagaaaccacatacagcaaaaaaaagattattgattttctt
tctgctctggaaggattcaaagtactatgtaaaattataggggttatggaggaagtcatt
gatgactttaagtctaaaatccttaagcaggtccttactctgcaggcaaaaaatcctgaa
ggccgctttcctgatttgactttagaactaaaccgatgggatacagcctttgaccatgaa
aaggctcgaaagactggactgattactcccaaggcaggatttgactctgattatgatcaa
gctcttgctgacataagagaaaatgaacagagcctcctggaatacttggagaaacagcgt
agtagaattggctgtaggaccatagtctactggggaattggtaggaatcgttaccagttg
gaaattcccgagaatttcatcacccgtaatttgccagaagaatatgagttgaaatctacc
aagaagggctgtaaacgatactggaccaaaacaattgagaaaaagttggctaatctgata
aatgctgaagaacggagagatgtatcattaaaggactgcatgcggcgactgttctataac
tttgataaaaattacaaggactggcaggctgctgtggagtgcatcgcagtgttggatgtc
ttactgtgcctggctaactacagtcgagggggtgatggtcctatgtgtcgtccagtaatt
ctgttgccaggagaagatactcctccctttctagaccttaaaggatcacgccacccctgc
attacgaagactttttttggtgatgactttattccaaatgacattctaataggctgtgag
gaagaggaagaaaatggcaaagcttactgtgtgcttgttactggaccgaatatggggggc
aagtctacgctcatgagacaggccggcctactggttgtaatggcccagatgggttgttat
gtaccagctgaagtgtgtaggctcacaccaatcgatagagtgtttactagacttggtgcc
tcagacagaataatgtcaggtgaaagtacattttttgttgaattgagtgaaactgccagt
atacttaaacatgcaacagcacattctctggtgcttgtggatgaattaggaagaggtact
gcaacatttgatgggacagcaatagcaaatgcagttgttaaagaacttgctgagaatata
aagtgtcgtacattgttttctacccactaccattcactggttgaagactattctcaaaat
gttgcagtgcgcctaggacacatggcatgcatggtagaaaatgaatgtgaagatcccagc
caggagactattaccttcctgtataaattcattaaaggagcctgtcctaaaagctatggc
tttaatgcagcaaggcttgctaatcttccagaggaggttattcaaaagggacatagaaaa
gcaagagaatttgagaagatgactcagtcactgcgattatttcgggaagtttgtctggct
agtgaaagctcgactgtagatgctgaagctgtccgtaagttgctgactttgattgaggaa
ttatag
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