Lentibacter algarum: LentiSH36_00007
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Entry
LentiSH36_00007 CDS
T09071
Symbol
rimK
Name
(GenBank) ribosomal protein S6 modification protein RimK
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
lalg
Lentibacter algarum
Brite
KEGG Orthology (KO) [BR:
lalg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lalg03009
]
LentiSH36_00007 (rimK)
Ribosome biogenesis [BR:
lalg03009
]
Prokaryotic type
ribosomal protein modification factors
LentiSH36_00007 (rimK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
Zn_protease
GSH-S_ATP
ATP-grasp_3
ATPgrasp_ST
R2K_3
LysX_preATP_grasp
GARS_A
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
WIF30500
LinkDB
All DBs
Position
8573..9979
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AA seq
468 aa
AA seq
DB search
MSLDKSGSILSFGWEEWVALPQLGLPAIQAKVDTGAKTSALHAYDIEVFGASSKPKVRFM
VHPVPGREDIVFACSAEIKDRREVTSSNGESENRYVIETNLLVNGHRWPIEITLSNRATM
SNRMLLGRQALKDHISIVATERFLQPELSYDVYHSKRVRETAPERALRVAVLSREDNYST
RRLVEEGEKRGHVVEVIDTTRCYMALNALAPEVHYDGKRLARYDAVIPRIGASITSYGTA
VVRQFETIGTFCVNSSQGITASRDKLHAHQLMARHKIGMPNTAFAASPKDTNSIVGLVGT
APLIVKLLESTQGKGVVLAETKKAAESVIDAFRGLKANFLVQNFVKEAAGEDIRCFVIGG
KVVASMRRTGAEGDFRSNLHRGGTAEAVKISKAERDVVLKATKAFGLHMAGVDLLRASDG
PKVLEVNSSPGLEGIEGASGKNIAGTLYEMIEARVRPAPVRKRGKAKA
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttgataagagtggttctattttgtcgttcggatgggaagagtgggtggctttg
ccccagctcggcttgccggcgattcaggcaaaagtagatacaggggcgaaaacctcggca
cttcatgcctatgatattgaagtgttcggtgcttcatctaagccaaaggtgcgttttatg
gtgcacccggttccggggcgtgaagacattgtttttgcatgctctgccgagatcaaggat
cgtcgcgaagtgacctcctccaatggggagagtgagaaccgctatgttatcgagaccaac
ttgctggtgaacggtcaccgttggcccattgagattacgctgagcaaccgtgcaaccatg
agcaaccgtatgttgcttgggcggcaggcgcttaaggaccatattagtatcgtagcgacg
gaacggtttttgcagcccgagctgagctatgatgtgtatcacagcaagcgggtgcgcgag
acagcaccagaacgggcactgcgcgtcgccgttttgagccgtgaggataattattcgacc
cgccgtcttgtggaagagggcgagaagcgggggcatgttgtcgaagtgatcgacacgacg
cgttgttatatggcgctgaacgcgcttgcgcctgaggtgcattatgacggcaagcgactg
gcgcgctatgatgcagttattccacggatcggagcctctatcacctcatatggtacggct
gttgtgcgccagtttgagaccatcgggacattttgtgtgaactcttcacaggggattacg
gcaagccgcgataagcttcatgcgcatcagcttatggcgcgacataagattgggatgccg
aacacggcttttgctgcgagtccgaaggacaccaactcgattgtcggcttggtgggtacg
gcaccattgattgtgaagcttttggagagcacgcagggcaagggcgttgtcttggcggaa
accaagaaggcggccgagtcggttattgatgcgtttcgcgggctaaaagcgaattttctg
gttcagaactttgtaaaagaagctgcaggtgaggatatccgctgttttgtgattggtgga
aaggttgtggcttcgatgcgacgcacgggtgcggagggtgactttcgctctaatttgcac
aggggtggcactgcggaggctgtgaaaatcagcaaggcagagcgcgatgtggtgctgaag
gcgacaaaggcttttggacttcatatggcgggcgttgatcttttgcgcgcgagtgacggt
ccgaaggttcttgaggtgaattcctcaccagggcttgaagggatagaaggcgcgagcggc
aagaatattgctgggacgctttatgagatgatcgaggcgcgggtgcggcctgcaccagtg
cgtaaacgcgggaaagcgaaagcgtga
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