Lentibacter algarum: LentiSH36_00063
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Entry
LentiSH36_00063 CDS
T09071
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase Pnp
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lalg
Lentibacter algarum
Pathway
lalg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lalg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LentiSH36_00063 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lalg03019
]
LentiSH36_00063 (pnp)
03016 Transfer RNA biogenesis [BR:
lalg03016
]
LentiSH36_00063 (pnp)
Enzymes [BR:
lalg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LentiSH36_00063 (pnp)
Messenger RNA biogenesis [BR:
lalg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LentiSH36_00063 (pnp)
Transfer RNA biogenesis [BR:
lalg03016
]
Prokaryotic type
tRNA degradation factors
LentiSH36_00063 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
WIF30555
LinkDB
All DBs
Position
62706..64853
Genome browser
AA seq
715 aa
AA seq
DB search
MFNITKKTMEWGEETLTLETGKVARQADGSVIATLGETSVMANVTFAKQPKPGQDFFPLT
VHYQEKYYAAGKVPGGFFKREARPTEKETLTARLIDRPIRPLFVPGFKNEVLVMCTVLSH
DLVNDPDMVAMIAASAALTISGAPFMGPVAAARVGFVDGEYVLNPTVDDMQDLRQNPEQR
LDLVVAGTKDAVMMVESEAYELTEAEMLGAVKFAHDSIQPVIDLIIELAESAAKEPFDFQ
PPEYTELYEAVKAAGETAMRAAFALTDKQERTAAVSAARATIMGALTEEQLADANLGSAL
KKLEAGILRGDVVKTGKRIDGRALDTVRPIVCETGLLPRTHGSALFTRGETQGLVVTTLG
TGDDEQFIDALHGNFKSNFLLHYNFPPYSVGEAGRVGPPGRREIGHGKLAWRALQAVLPA
ATDFPYTIRLVSEITESNGSSSMASVCGGSLSMMDAGVPLKSAVAGVAMGLILEDDGSYA
VLTDILGDEDHLGDMDFKVAGTADGITSLQMDIKVAGITQEIMEKALEQAKAGRLHILEE
MNKSIDGAQDFSIHAPRIETMQIPTDKIREVIGSGGKVIREIVEVSGAKVDINDEGIIKI
ASPNGEAIKKAYDMIHSIVAEPEEGQVYDGKVVKIVDFGAFVNFFGKRDGLVHVSQIESR
RLNHPSDVLKEGQDVKVKLLGFDDRGKVRLSMKVVDQQTGEEIAPDAKKDGDSEE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacattacgaagaagaccatggagtggggcgaagaaacgcttacacttgaaacg
ggcaaggttgctcgtcaagccgatggctctgtcatcgcgaccctcggtgaaacatctgtc
atggccaacgtgacattcgccaagcagcctaagccgggccaagactttttcccgctgacg
gttcactaccaagagaaatactatgcggccggcaaagtgcctggcggcttctttaagcgc
gaagcgcgcccgaccgaaaaagaaacactgacagcacgcctgatcgatcgtccgatccgc
ccactgtttgttcctggcttcaaaaacgaagttctggtcatgtgtaccgtgctgtcgcac
gacctcgtaaacgaccctgacatggttgcgatgatcgctgcttctgcagctctgaccatt
tctggtgcgccgttcatgggcccagttgctgcggcacgtgtcggctttgttgacggcgaa
tatgtgctcaacccaacggttgatgacatgcaagacctgcgtcagaatcctgagcagcgc
cttgacctcgttgttgcaggtacaaaagacgccgtaatgatggttgaatcagaagcgtat
gagctgaccgaagcagagatgcttggtgcggtgaaatttgcacatgacagcattcagcct
gtgatcgacctgatcattgagctggccgaatctgctgcaaaagagccgtttgacttccag
ccaccagagtacacagagctatatgaagctgtgaaagcggcaggcgaaacagcgatgcgt
gctgcatttgctttgaccgataagcaagagcgtacggctgctgtttctgcggcacgagca
accatcatgggcgcgctgacagaagagcaacttgcagatgcgaacctcggttctgctctc
aagaagcttgaagctggcatcctgcgtggcgacgttgtgaaaacaggcaagcggatcgat
ggtcgcgcgcttgatacggtacgtccgattgtttgcgagacaggtctcctgccacgcaca
cacggctctgcattgtttacacgtggcgaaactcagggcctcgttgtgacaacgctcggc
acgggcgacgacgaacagttcatcgacgcactgcacggcaacttcaaatccaacttcctg
ctgcactacaacttccctccctattcagttggtgaagctggtcgcgtgggccctcccggt
cgccgcgaaatcggccatggtaagctggcttggcgtgcgcttcaggctgttttgcctgct
gcgactgatttcccatacacaatccgccttgtgtcagagatcacagaatcaaacggctca
tcttcgatggcgtctgtttgcggtggctcactgtcgatgatggatgctggtgtcccgctc
aagtctgcggttgctggtgttgcgatgggtctgatccttgaagatgatggttcctatgct
gttctgacagacatccttggcgatgaagatcacctcggtgatatggacttcaaagtcgca
gggactgccgacggcatcacctcgctgcagatggacatcaaagtcgcgggcatcacgcaa
gagattatggaaaaagcccttgagcaagcgaaagcgggccgtctccatatcctcgaagag
atgaacaagtcgattgatggcgcacaggatttctcaatccacgcaccacgcatcgagacc
atgcagatcccgacggataaaatccgcgaagtgatcggctcgggcggcaaagtcatccgt
gagatcgttgaagtgtctggcgcgaaagttgatatcaatgacgaaggcatcatcaagatt
gctagcccgaacggcgaagcgatcaagaaagcctatgacatgattcactcgattgtggct
gagccagaagaaggccaagtttacgacggtaaagttgtgaaaatcgtcgacttcggcgca
tttgtgaacttctttggcaagcgtgacggccttgtacacgtgagccaaattgagagccgt
cgcctgaaccatccttcagatgttctgaaggaaggccaagacgtgaaagtaaagctcttg
ggctttgacgatcgcggcaaagtgcgtctctcgatgaaggttgttgatcagcaaacaggc
gaagaaatcgcgcctgacgcgaaaaaagacggcgacagcgaagagtaa
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