Lentibacter algarum: LentiSH36_00178
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Entry
LentiSH36_00178 CDS
T09071
Name
(GenBank) autotransporter secretion inner membrane protein TamB
Organism
lalg
Lentibacter algarum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
WIF30668
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All DBs
Position
195686..199120
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AA seq
1144 aa
AA seq
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MRYVFALCFVLMHALSVHAQSAEQDKDYITTYLEEALSDAGSKVVITGFMGALSSRATME
SLTIADDRGVWLTMKDAVLDWNRASVLQGNIQINEISAASLELLRLPGTAAATVRPEARS
FAIPELPVSVNIGAISVKKVSLGEPVVGVAAVASVTGALMIAEGEGEAKLTITREDSTAG
IFKLEAAFSNATRILALNASLREAADGIVANLIALPGRPPLDLAITGEDMIDNFAANVVL
KTDGRPRLTGRILTLANEAAQDGASDEGAPNRTVEADIEGDLTSLFAPQYSDFLGANVRL
ESRVSLFDDGRKALDDLTLTAAALRLKGDVALAADGLPERFQLDAVLQDPEGSASLLPIP
GDETWVQSAKISASFDSQMGDTWSFTSDLEGYERAGVMLEAAQISASGVIARGAERKVTA
RIDGVAAGLELVDAALAEALGDKVSLGADLAWQDGQSLAVSNLDVRASGLELGGGGTIDG
LDSAMTLQGAIEAKTPSIKRFSAIAGQSLGGGIVASLEGRYAVLSGEVDLTFAATGADLR
VGETQIDRLIGGESRLEASVLRTTSGLSLRSSSIVARGGTARAQGRVATDASHLTFDATL
NNAEQFVSGLNGPANMTGTATQTPVGWSVSLDMQAPRAIALAASVELPKNAPLYAEIDAT
LGSIAWIVPDLAGPGSVKATVRKSGAQWGVNARAEGPSGSTVTVDGLIAANATRAGLTLV
GRVPLGLVNRRLAPNTLQGFADFDMKLNGPLALSSLDGTLRTNGARLSLPALRNALGDID
ATITVSGGSAVVRSSASVSSGGEVKAQGRIGLQAPYVTRLDVDVENVGFSDPKLYKTSVN
GSLVLGGAIASSLSVSGQLVLGETEVRVPSTGLSSFGDIPEITHLHEPAAVRLMRAHAGL
LGSDNTGDAAVSSNVALDVKILAENKIFVRGRGLDAELGGQLTLTGTTTDIIPKGRFELI
RGRLDILGKRLEMQEGYASLQGSLTPHLRLVASTSTGEHLVLVTVEGAADEPEITFTSEP
ELPSDEVLARLLFGRDVTKISAFQTVQLASAVATLAGRGGIGIVEKLRMKAGVDELDITT
DEAGETTLRAGKYISETVYTDVEVETTGQSRINLNLDLSNSTKLRGTVDTEGKTGIGLFF
EKDY
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgcgctatgttttcgccctctgttttgtgctgatgcatgcactttcggtccatgcgcag
agcgctgaacaagataaggactatatcaccacatatcttgaagaggcgctctctgatgcg
gggagcaaggttgtcatcactggttttatgggggcattgagttctcgcgccacgatggaa
agcctcacgattgctgacgatcgtggggtctggctgacgatgaaggatgcggttcttgac
tggaaccgagcatctgttttgcagggtaatatccagatcaatgagatttcggcagcaagc
cttgagttattacgactgcctgggacagctgcggccaccgttcgtcctgaggcgcgcagc
tttgccataccagaactgcctgtgtcggtgaatattggcgcgatttcggtgaaaaaggtt
tctttgggcgaacccgtggtgggtgtggccgccgtggcctctgtgaccggggcgctcatg
atcgcggagggtgaaggtgaagccaagctgaccatcacccgagaagacagcacggcgggt
attttcaagcttgaagccgctttttccaacgcgacccgcattcttgccctcaatgcgtcc
ttgcgagaggccgcagatgggattgttgccaatctgattgctcttccagggaggccgcct
ttggatttggcgataactggcgaagatatgatcgacaattttgccgccaacgtagttttg
aaaactgatgggagaccgcgactaacaggccgtattttgacgctggcaaatgaagcggca
caagacggagcaagcgatgaaggcgcgcccaaccgcacagttgaggctgatatcgagggt
gacttaacatcgctttttgcgccgcaatatagcgactttttgggcgcgaatgttcggctt
gagagccgggtcagcttgtttgacgacgggcgcaaagcgctggatgatctgaccctcaca
gctgcggctttgagactgaagggggacgtggcactggccgctgatggtctgcctgagcgc
tttcagttggatgcggttttgcaagaccccgaaggcagcgcatcgctcttgccgatccct
ggagatgaaacatgggtccagagtgcaaagattagtgccagttttgacagccagatgggg
gatacgtggtcatttacgtctgatttggaggggtatgagcgcgcgggtgtgatgcttgag
gcagcacagatttctgccagcggtgtgattgcgcgtggtgcggaacgaaaagtcacggca
cggattgacggtgttgcagcgggtcttgagcttgttgatgcggcgcttgcggaggctctt
ggcgacaaggtttcactgggggctgatcttgcgtggcaagacgggcaatcgcttgctgtg
agcaatcttgatgtgcgtgcgagtgggcttgagctgggaggcggcggaacaatagatggg
ctcgacagtgccatgacgctgcaaggcgcgatagaggcgaagacgcccagcatcaagcgc
ttctcagctattgctgggcagtctcttgggggtggaatcgttgcgagccttgaaggccgc
tacgctgttttgagtggtgaggttgatctaacgtttgcagccacgggggcggacctacgt
gtcggggaaacacaaatcgatcgattgattggaggggaaagtcgcctagaggcctcagtg
ttgcgtacgacgtcgggactctcgctccgatcttcaagcattgttgcgcgcggcgggact
gctcgggcgcagggccgcgtcgctacagatgcaagccacctgacatttgatgcgacactc
aacaacgcggagcagtttgtgtcaggtctcaacggacccgcaaacatgacagggacagct
acacagacgcctgtgggctggtcggtcagcttggatatgcaagcgccacgtgccattgct
ttggccgcaagtgttgagctgccgaagaatgcgcccttatatgccgagatcgatgcaact
ttgggctcgattgcgtggattgtaccagatttggcggggcccgggagcgtcaaggcaacg
gtgcgcaaatctggcgcccagtggggcgtcaatgcgcgcgcagagggcccgagtggaagc
acagtgactgttgatggtctgattgcggctaacgcgaccagagcaggattgacgctcgtc
gggcgcgttcctctggggttggttaaccgtcgtttggcacccaacacgctgcaaggtttt
gctgattttgatatgaagctgaatggcccgctcgccttgtcctcacttgatgggacgttg
cgcaccaatggcgcgcgcctgtctctgcccgcactgcgcaatgctctgggtgatatcgat
gcgaccataactgtgtcgggcggcagtgcggttgtgcgctcgagcgcgtctgtgtccagc
ggaggcgaggtgaaggcgcaggggcgtattgggctgcaagcgccttatgtcacgcgtctt
gatgttgacgttgaaaatgtcggcttcagcgaccctaagctatacaaaacaagtgtgaac
ggcagcctcgttttgggtggtgcgattgcatcaagcctttcagtttcaggtcagctggtg
cttggtgaaaccgaggtgcgcgtcccgtcaacggggctaagctcttttggggatatacca
gaaatcacccatttgcatgagcctgctgctgtgcgccttatgcgcgctcatgctgggctg
ttgggcagtgataatacaggcgatgcagctgtcagctcaaatgttgcgctggatgtgaaa
attctggccgaaaacaagatatttgtgcgggggcgcgggcttgatgcggaattaggcggt
cagctgacgctgacaggaacaaccacagacattatcccgaaagggcgctttgagcttatc
cgtgggcgcttggacattttgggcaagcggctcgaaatgcaggagggctatgccagtctg
caagggagcctgaccccacatttgcgtttggtcgcgagcaccagcacgggagaacatctt
gttttggtgacagttgaaggcgcggcagatgagcctgaaatcacgttcacatctgagccg
gagctgccaagcgacgaagtgttggcgcggctactctttgggcgcgacgttacgaaaatt
tcggcgtttcaaaccgtacaactggcttcggcagtggccactttggctgggcgtggaggc
attggtattgtcgaaaagctacgcatgaaagccggtgttgatgagctcgacatcaccaca
gatgaagccggtgaaacaactttgcgagccggaaagtatatcagcgagacagtctacacc
gatgtagaggttgagacgactggacaaagccggatcaacttgaatcttgatctgtcaaac
tccaccaaactgcgaggcactgtcgatactgaagggaaaacggggattgggctgtttttt
gaaaaagattactga
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