Lentibacter algarum: LentiSH36_00370
Help
Entry
LentiSH36_00370 CDS
T09071
Symbol
rhlE2
Name
(GenBank) putative ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
lalg
Lentibacter algarum
Pathway
lalg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lalg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LentiSH36_00370 (rhlE2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lalg03019
]
LentiSH36_00370 (rhlE2)
Enzymes [BR:
lalg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LentiSH36_00370 (rhlE2)
Messenger RNA biogenesis [BR:
lalg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LentiSH36_00370 (rhlE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
NACHT
HEM4
SUa-2TM
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
WIF30857
LinkDB
All DBs
Position
complement(371311..372621)
Genome browser
AA seq
436 aa
AA seq
DB search
MLGLPARLSTNLQELGLTEPTPIQAKAIPHAMNGRDVLGLAQTGTGKTAAFSLPILTAIG
RMEGKPAPKSVRGLILAPTRELAKQIQEAMIGFAKGTGTRINLVIGGASLNVQANKLERG
TDILVATPGRLLDLIDRRAVRLDEARFLVLDEADQMLDLGFIHALRKIATLLPKERQTML
FSATMPKNMNEIANAYLTDPIRVETAPPGKPADKIDQSVHFVSQAAKPALLIEHLGKHPD
EAALVFGRTKHGSEKLKKKLEAAGFAADSIHGNKSQGQRERAIKAFKEGKVKVLVATDVA
ARGIDIPTVRYVYNYELPNVADNYVHRIGRTARAGRDGSAVAYCSPEEIGELKDIQKLIG
KDIPVEGKASWAAELLEKTKAGAKRPNGGGGGRGRGGKAGGGGGGRGRGKPGGGAANAGG
GGGKPQQRRRRPSNAA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgctgggccttcccgcccgcctttcgacaaacctgcaagagcttggcctcacagagccc
acgcccattcaggccaaagccatcccccacgccatgaacggccgtgacgtgctcggcctc
gcccaaacgggcacaggcaaaacagccgccttctccctgcccatcctgacagccattggc
cgtatggaaggcaagccagcgcccaagtccgtgcgcggccttatccttgcgccaacgcgt
gagctggccaaacaaattcaggaagccatgatcggcttcgccaaaggcacaggcacacgg
atcaacctcgtcatcggcggtgcctccctcaatgtgcaggccaataagcttgagcgcggc
acagatattctcgtcgcgacacccggccgtctgcttgatctgatcgatcgtcgcgccgtg
cgccttgacgaagcgcgcttcctcgttctcgatgaagctgaccaaatgcttgatctcggt
tttatccacgcattgcgcaaaatcgcgacacttctgcccaaagagcgccagaccatgcta
ttctcggccactatgccgaaaaacatgaacgagatcgccaacgcctacctgaccgatccg
atccgtgtggaaacagcccctcccggcaaacccgctgataaaattgaccaatcagttcac
ttcgtgtcccaagcagccaagcctgccctgctcatcgagcacctcggcaagcacccagac
gaagcagcgctagtcttcggacgcacaaagcacggctccgaaaagctgaagaaaaagctc
gaagcggcgggctttgccgccgacagcatccacggcaacaaaagccagggccagcgcgaa
cgtgcaatcaaagccttcaaagagggcaaggttaaagttctcgtcgccacagacgtcgcc
gcacgcggcatcgacatcccgactgtgcgctacgtttacaactacgagctgcccaatgtc
gcggacaactatgtgcaccgcatcggccgtacagcgcgcgcaggtcgtgatggcagcgcg
gtcgcgtattgctcgccagaagagatcggtgaattgaaagatattcagaagctcatcggc
aaggatatccctgttgaaggcaaagcctcatgggccgccgaacttcttgaaaaaaccaaa
gcaggcgcaaagcgccccaacggcggcggaggcggtcgtggtcgtggcggtaaagctggt
ggtggcggcggcggccgtggtcgcggcaagcccggtggcggagccgccaacgcgggcggc
ggtggcggcaagccccaacagcgcagacgccgcccgtctaacgcagcctaa
DBGET
integrated database retrieval system
