Lentibacter algarum: LentiSH36_00376
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Entry
LentiSH36_00376 CDS
T09071
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lalg
Lentibacter algarum
Pathway
lalg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lalg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LentiSH36_00376 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lalg03021
]
LentiSH36_00376 (rpoA)
03400 DNA repair and recombination proteins [BR:
lalg03400
]
LentiSH36_00376 (rpoA)
Enzymes [BR:
lalg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LentiSH36_00376 (rpoA)
Transcription machinery [BR:
lalg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LentiSH36_00376 (rpoA)
DNA repair and recombination proteins [BR:
lalg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LentiSH36_00376 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RepD-like_N
Motif
Other DBs
NCBI-ProteinID:
WIF30863
LinkDB
All DBs
Position
376672..377688
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWQELIKPTQLDVKPGNDPSRQATLVAEPLERGFGLTLGNALRRILMSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIVLNLKGVAVRMDVEGPKRVSINAKGPGVVTAGDISD
SAGIEILNRDHLICHLDDGADLYMELTVNTGKGYVAADKNKPEDAPIGLMPIDAIFSPVK
RVSYDVQPTREGQVLDYDKLTMKIETDGSVTPDDAMAYAARILQDQLSIFVNFDEPEAAG
RQEEDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKFEDAF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccataagaattggcaggaactgatcaagccgacacagcttgatgtaaagccaggc
aacgacccgtcgcgtcaggcgacgctggttgcagagccgcttgagcgtggctttggtctg
acgctcggcaacgccctgcgccgtattctgatgagctcgctgcaaggcgcggccattacg
tcggtacagatcgacaacgtattgcacgagttctcaagtgttgctggtgtgcgtgaagac
gtcaccgacatcgtcttgaacctcaaaggcgtcgccgttcgtatggacgtcgaaggccca
aagcgtgtttctatcaatgccaaaggcccaggtgttgtcactgccggtgacatttctgac
agcgctggtatcgaaatcctgaaccgtgaccacctgatctgccaccttgatgatggcgcc
gatctctacatggagctgactgtcaacactggcaaaggctatgtggctgcggataagaac
aagccagaagacgcgcctatcggccttatgccgatcgatgcgatcttctcacctgtgaag
cgcgtcagctatgacgttcagcccacacgtgaaggtcaggttctggactatgacaaactc
acgatgaaaatcgaaacagacggctcggtgacgcctgatgacgcgatggcttatgctgcg
cgcatcttgcaagaccagctttctatcttcgtgaacttcgatgagcctgaggccgctggc
cgtcaggaagaagacgatggtctcgagttcaacccacttctcctgaagaaagtggacgag
ctggaactgtctgttcgttcggcaaactgcctgaagaacgacaacatcgtttacatcggc
gatctgatccagaaaaccgaagccgaaatgctgcgcacgccaaactttggccgcaagtcg
ctgaacgagatcaaggaagtgctttcgggcatgggcttgcacctcggcatggacgtagaa
gactggccaccagacaatatcgaagatctggcgaagaaattcgaagacgccttttaa
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