Lentibacter algarum: LentiSH36_00428
Help
Entry
LentiSH36_00428 CDS
T09071
Name
(GenBank) putative uracil DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lalg
Lentibacter algarum
Pathway
lalg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lalg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LentiSH36_00428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lalg03400
]
LentiSH36_00428
Enzymes [BR:
lalg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LentiSH36_00428
DNA repair and recombination proteins [BR:
lalg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LentiSH36_00428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF2300
Motif
Other DBs
NCBI-ProteinID:
WIF30914
LinkDB
All DBs
Position
427693..428469
Genome browser
AA seq
258 aa
AA seq
DB search
MESAQEYWAARAALEWQVELGADEALSEGPVNRFELVEKVKAKPASAKVEAAPHVQSGYV
EAPKIDAVAEARTAAEQAQDLGQLRAALDRFEHCELKRGARNLVFADGAAGARVMILGEA
PDREGDREGKPFVGQSAALLGKMLGAIGLSLEESVYVSTVMPWRLLNQSGPSPDEIAMMR
PFVARHVALAKPDILILMGNIACDAALGQRGITRLRGTWGEAFGLPVMPMFPPETLMRQP
ELKRAAWADLLEIKARLA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggaatcggcacaagaatactgggcggcgcgggcggctcttgaatggcaggttgaactc
ggggctgatgaggcgctgagcgaagggcctgtgaaccgctttgagcttgttgagaaggtg
aaggctaagcctgcctctgcgaaagtcgaggcggcgccacatgtgcagtctggatatgtg
gaagcgcccaagattgacgctgtggcggaggcccgcacggcggccgagcaagctcaggat
ttgggccagctgcgtgcggcgctggaccggtttgagcattgcgagctcaagcgcggggcg
cgcaaccttgtgtttgccgatggcgcggctggggcgcgtgtgatgatccttggcgaagcg
ccagaccgagagggggaccgcgagggcaagccttttgtcgggcagtcggctgcccttttg
ggaaagatgcttggcgcgataggtctgagccttgaagaaagtgtttatgtcagcacagtg
atgccgtggcggcttttgaaccagtcggggccaagtcctgacgagattgctatgatgcgg
ccctttgtggcgcggcatgtcgctttggcgaagcctgacatcttgattctgatgggtaat
attgcgtgtgatgcggcgctggggcagcgcggaattacgcggctgcgcggcacatggggc
gaggcgtttggcttgcctgtgatgccgatgtttccgccagagactttgatgcgccagcct
gagctgaagcgcgcggcatgggcggatttgttagagattaaagcgaggcttgcatga
DBGET
integrated database retrieval system
