Lentibacter algarum: LentiSH36_00837
Help
Entry
LentiSH36_00837 CDS
T09071
Name
(GenBank) Superfamily I DNA and RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lalg
Lentibacter algarum
Pathway
lalg03420
Nucleotide excision repair
lalg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lalg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LentiSH36_00837
03430 Mismatch repair
LentiSH36_00837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lalg03400
]
LentiSH36_00837
Enzymes [BR:
lalg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LentiSH36_00837
DNA repair and recombination proteins [BR:
lalg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LentiSH36_00837
MMR (mismatch excision repair)
Other MMR factors
LentiSH36_00837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
WIF31312
LinkDB
All DBs
Position
837715..840039
Genome browser
AA seq
774 aa
AA seq
DB search
MVSLSEKALMARGAPYLNDLNPAQRAAVEQLDGPVLMLAGAGTGKTKALTARIVHLLNTG
RAQPNEILAVTFTNKAAREMKERVARLLGQSVEGMPWLGTFHSICVKILRRHAELVGLKS
NFTILDTDDQLRLLKQLVQAAGIDDKRWPARMLVGIIDGWKNRAWLPENLPAAEGSAYDG
MGPQLYAQYQTRLRELNAADFGDLLLHVVSIFQKHDDVLALYQRWFKYVLVDEYQDTNVA
QYLWLRLLAGGHKNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGAAVVRLEQNYRSTPH
ILAAAAGVIAGNENRLGKELWTEVEEGEKVRLIGHWDGEEEARWIGEEAEALQRGTRGIG
PKSLDDMAILVRASHQMRAFEDRFLTIGMPYRVIGGPRFYERLEIRDAMAYFRLVVSPED
DLAFERVVNTPKRGLGDKAQQKIQMEARANFLPLTGGAQLLLDAKGIGGKGAGELQRFLD
NLQRWQRLEASPEVSHVELAEIILDESGYTEMWQNDKTPEAPGRLENLKELVKALEQFEN
LQGFLEHVGLIMDNDKTDADEKISIMTLHAAKGLEFPVVFLPGWEDGLFPSQRSMDESGQ
KGLEEERRLAYVGITRAEEICTISFAGNRRVYGQWQSQMPSRFIDELPEAHVDVMTPPGL
YGGGFGAAQPSVRSNLAESAAEADVYNSPGWKRMQARASQRPTPKAQGGAAYIVEATAVS
SFMQGDRVFHTKFGYGDVIGVEGDKLEINFDKAGVKKVVARFIVSAADADNIPF
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
gtggtatctctctctgaaaaagccctgatggcacggggcgcgccgtatttgaacgacctc
aaccctgcgcagcgtgcggctgtggagcagttggacgggcctgttctgatgttggcggga
gcgggcacgggcaagaccaaggctctgaccgcgcggattgtgcatctgctcaatacgggg
cgtgcgcaacccaacgagatattggctgtgacctttaccaataaggctgcgcgagaaatg
aaagagcgggttgcacgcttgcttgggcaatctgtggaggggatgccttggcttgggacg
tttcactcgatttgtgtgaaaattctgcgccgtcatgccgagcttgtgggcctcaagagc
aatttcaccattctggacaccgatgaccagctgcgccttcttaagcaacttgtgcaggcg
gcagggattgatgacaagcggtggcccgcgcggatgctggtgggtatcattgacggctgg
aaaaaccgtgcatggcttcctgaaaacctgcccgcggcggaaggcagtgcatatgacggg
atggggccgcagctttatgcgcagtatcagacccgcctgcgagagttgaatgcagcggat
tttggcgatttgcttttgcatgtggtgagtatttttcaaaagcatgacgatgtgctcgcg
ctctatcagcgctggtttaaatatgtgctggtggacgagtatcaggacaccaacgtagcg
cagtatctttggctgcgtttgcttgcgggtgggcacaaaaacatctgctgcgtgggcgat
gatgaccagtcgatctatggctggcggggtgcggaagtgggcaatatcttgcgctttgag
aaagactttcccggcgcagccgtggtgcgtctggagcagaactatcgctcgacaccgcat
attttggcggcggcggcaggtgtgattgctggcaatgagaaccggcttggcaaggaactt
tggaccgaagtcgaggagggcgagaaagttcgtctgatcggccattgggacggcgaggaa
gaggcgcgctggattggcgaggaggctgaggctttgcagcgtggcacacgcggaattggg
ccaaaatcgctcgacgatatggcgattcttgtgcgcgcctcgcaccagatgcgcgctttt
gaggaccgttttctgaccatcgggatgccgtatcgggtgatcggcggaccacggttttac
gagcgtttggaaattcgcgatgcgatggcttacttccgcctcgtggtgagccccgaggac
gaccttgcttttgagcgggtggtgaacacgcccaagcgcgggctgggcgacaaagcgcag
cagaaaatccaaatggaggcgcgggccaattttctgccgctgacgggcggtgcgcagctg
cttctggacgccaagggtattggtggcaagggcgcgggcgagcttcagcgctttctggac
aatctgcagcgctggcaacggctggaggccagtcctgaggtgagccatgtggagctggcc
gagatcattctggacgagagcggctataccgaaatgtggcagaacgacaagacgcccgaa
gcgccagggcggctggaaaacctcaaggagcttgtcaaagcgctggagcaatttgaaaat
ctgcaaggatttttggagcatgtcggcttgatcatggacaatgacaagaccgatgcggac
gagaaaatcagcataatgacgctgcatgcggccaaggggctggaatttcctgtggtgttt
ttgcccggatgggaagacgggctgtttccgtcgcagcgctctatggacgaaagcgggcag
aaaggcctcgaggaagaacggcggcttgcctatgtggggatcacccgcgcggaggagatt
tgcaccatttcattcgcgggcaaccgacgggtgtatgggcaatggcagagccagatgccg
agccgctttattgacgagctgcctgaggcgcatgtggatgttatgacgcctcccgggctt
tatggtggcggatttggagccgctcagccctcggtgcgctcaaaccttgcggagagtgcg
gcggaggcagatgtttataactctcctggctggaagcggatgcaggcgcgcgcgagccag
agaccgaccccgaaagcgcagggtggcgctgcctatattgtcgaggcgacggcggtgtct
tcgtttatgcagggggatcgcgtgtttcacaccaagtttggctatggcgatgtcattggg
gtcgagggcgacaagctcgagatcaactttgacaaggcgggtgtgaagaaggttgtggcg
cgctttatcgtgagcgcggcggatgcggacaacatcccgttttaa
DBGET
integrated database retrieval system
