Lentibacter algarum: LentiSH36_01375
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Entry
LentiSH36_01375 CDS
T09071
Name
(GenBank) RTX toxin
Organism
lalg
Lentibacter algarum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
HemolysinCabind
Hint_2
CshA_repeat
Big_6
HYR
Motif
Other DBs
NCBI-ProteinID:
WIF31842
LinkDB
All DBs
Position
complement(1400355..1405985)
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AA seq
1876 aa
AA seq
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MADLVLNWGLLGAFGTNVEPTQTVDTGGINVTIGFDAQDEEASGVTFNAPGYVAESDPFD
SQSFLKLSGQGGEGGVDATSTTTLDFTSSNALFEDCVQNVTFRLNDIDGGGNDIDPTSAL
HQDIVTVRAYGPDGNELPVTFTTGSNVTATGNTLSDGDTNFGYEDGEASTLVSVAGPVTR
IEIEYANGDVGEQTVMVSDLHFSTCPADDNDAPVVVDDSALTDEDTAVVVDVLGNDSDPE
GDPLTVTDTSEPANGSVQINGDGTVTYTPNTGFIGTDSFEYTVTDGQGNLSTATVTVTVA
DPADNQPAMLVDDAAETDEDTAVVIDVLGNDSDPEGDALTVTDTTEPANGSVVINADGTV
TYTPDAGFTGEDTFEYSVEDEGGNISTATVTVTVGDTGPNAPATPVDDMATTDEDTPVVI
NVLSNDTDPEGDVLTVVDASEPVNGTVVINPDGTVTYTPNAGFSGQDTFEYTVEDAGGSY
STAVVFVQVGDGDLPPVATDDADTTDLDTPVVIDVLGNDSDPEGEALTVTDTTEPLNGSV
VINADGTVTYTPDAGFTGTDTFDYTITDPAGNESTATVTVVVEDPADLPPVATDDADTTD
LDTPVVIDVLGNDSDPEGEALTVTDTTEPLNGSVVINADGTVTYTPDAGFTGTDTFDYTI
TDPAGNESTATVTVVVEDPADLPPVATDDADTTDLDTPVVIDVLGNDSDPEGEALTVTDT
TEPLNGSVVINADGTVTYTPDAGFTGTDTFDYTITDPAGNESTATVTVVVEDPADLPPVA
TDDADTTDLDTPVVINVLGNDSDPEGEALTVTGTTEPLNGSVVINADGTVTYTPDAGFTG
TDTFDYTITDPAGNESTATVTVMVQDPAMPDGIVSGTPNDDLIDTGYTGDPDGDLIDAND
QIIPGEDVNDDIVRAGDGADTVLAGDGDDDVQGGTGDDDLSGEAGDDSLFGEEGNDIIDG
GDGDDTIDGGDGRDSVGGGDGNDVIDTSGSDPLIDEQVFPGLPVDSDPEDDRDNVSGGAG
DDIIRTGDDRDTITGGTGDDTIFAGIDDDEVFGNEGNDSIVDIQGADFIVGGDGDDTIEA
GTNTFSDYIGDDPNLPVAGFPDILTDPNTTDGLDTVFGGAGNDVISTGDDADEIDGGTGN
DTIDGGIDDDTITGGTGDDSIIGQHGADSIFGNDGDDFINAGGSTYGGNEPDATDILPEN
DRDFADGGAGNDTIFGEDDDDTLIGGDGDDFLDGGIDEDSLTGGNGSDTGIGGQGDDFID
LSGFLEEPDSTDPNPGNDRDLAEGGDGNDVIDSSGGDNLTDDVDTDPEDDRDSIIGGNGD
DTITTGDDDDTIVSGAGNDVVDAGIDDDLVTTGDGSDTVLGGQGNDTIDTSGSFLPLIDE
ADPFPDNDRDSVDAGAGDDVITTGDDDDTVIGGAGDDTIDTGIDDDLVDAGDGNDSVIAG
QGNDTVVAGAGDDTVDGGDGDDSIIGGDGCDVVDAGAGNDFIDTSDPSPILDATDPNPLD
DCDSVIGGAGNDTILTGDDADTIFGGLGDDLIDAGIDNDLVDGGAGNDTIDAGEGDDVVD
GGAGDDSILGGLGADTLLGGDGQDYFGAITGGDVVDGGDGPAGERPNPDFDPALPISAEN
PEFVPNDFDTLDLTGAAEANNPGGSLNIIYTSDDREDGIVEFRDADGNVTSTMAFEEIEN
VVPCFTPGTAIATPRGERLVEDLKVGDKIITRDNGIQEIRWMGQKTLSGHELARSPNLRP
ILIQKGALGNNLPEHDILVSPQHRILINNERTSLYFEETEVLAAAKHLTELKGVDEVGTL
GVTYVHFMFDNHEVVLSNGAWTESFQPGQSVIDGLGTEQRDEIFQLFPELKTEEGIKDYT
AARRALKKHEAKLLVR
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atggctgatctggtactgaattggggtttgttgggcgcgtttggcaccaatgttgaacca
acgcaaactgtcgacaccggcggtattaacgtcaccataggctttgatgcacaggacgaa
gaggcctccggcgtcacgttcaacgcgccaggctatgttgccgagagtgatccgtttgac
agccagtctttcctgaaactgtccggtcaaggcggcgaaggcggtgtggatgccacatca
accaccacgcttgattttacatcctcaaatgccttgtttgaagattgcgtgcagaacgta
acattccgcctcaatgatattgacggcggtggcaatgatatcgatccgacatctgcccta
caccaagacatcgtcaccgtccgcgcctatggccctgatggcaacgagctgcctgtgact
ttcacaacaggttccaatgtgaccgcaactggcaacaccctgtcagacggtgatacgaat
ttcggctatgaagatggcgaagcctcaacccttgtttccgtggccggccccgtcacgcgg
atcgagattgagtatgccaatggcgacgttggtgaacagactgttatggtctctgatttg
cacttctcgacatgccccgccgatgacaatgatgcgcctgttgtggtggatgacagcgcg
ttgaccgatgaggacacggctgttgtcgtggacgttttgggcaacgacagtgacccagag
ggcgaccctctgactgttacggatacgtctgaacctgccaatggttccgttcagatcaat
ggcgacggaacggtgacctacacgccgaacacaggctttattggcacagatagctttgaa
tatactgtgacagacgggcagggaaacctgagcacagcgactgtcaccgtgactgttgcg
gaccccgcggacaatcagccagccatgctcgtggatgatgcggctgaaaccgacgaagac
acagctgttgtgatcgacgttttgggcaacgacagtgacccagaaggcgacgctttgact
gtgacagacacaacggagccagcgaatggttcggttgtcatcaatgcggacgggaccgtg
acctatacgcccgatgccggctttacgggcgaagacacgtttgaatactccgttgaggac
gaaggcggcaacatttcgaccgcgactgtcactgtgacggttggcgacacaggcccgaac
gcccctgcgacgcccgtggacgatatggcgacaactgatgaagacacgcctgtcgtgatc
aacgtgttgagcaatgacactgacccagagggcgatgttctaacagtcgtggatgcgtcc
gagccagtcaatggcaccgtcgttattaacccggacgggacagtgacttacacaccgaat
gccggcttctcaggccaggatactttcgaatacacggtggaagacgcgggggggagctat
tccacagcggttgtcttcgttcaggttggcgacggtgatctgccgcctgttgcgacggat
gatgcggatacgaccgatctggacacgcctgttgtgattgatgttctggggaacgactct
gacccagagggcgaagcgctgacagtgacggacacaacagagccattgaacggctcggtt
gtgatcaacgccgatggcacagtgacctacacgcctgatgcgggcttcacgggcactgac
acgtttgactacacaatcacggaccctgcgggcaacgaaagcactgcgacggtgacggtt
gttgtggaagaccctgcagatctgccgcctgttgcgacggatgatgcggatacgaccgat
ctggacacgcctgttgtgatcgacgttctgggcaacgactctgatccagaaggcgaagcg
ctgacagtgacggacacgacagagccattgaacggctcggttgtgatcaacgccgatggc
acagtgacttacacgcctgacgcgggcttcacgggcacagacacgtttgattacacaatc
acggaccctgcgggcaacgaaagcaccgcgacggtgacggttgttgtggaagaccctgca
gatctgccgcctgttgcgacggatgatgcggatacgaccgatctggacacgcctgttgtg
atcgacgttctggggaacgactctgacccagagggcgaagcgctgacagtgacggacaca
acagagccattgaacggctcggttgtgatcaacgccgatggcacagtgacctacacgcct
gatgcgggcttcacgggcactgacacgtttgactacacaatcacggaccctgcgggcaac
gaaagcaccgcgacggtgacggttgttgtggaagaccctgccgatctgccacctgttgcg
acggatgatgcggatacgaccgatctggacacgcctgttgtgatcaatgttctggggaac
gactctgatccagaaggcgaagcgctgacagtgacgggcacgacagagccattgaacggc
tcggttgtgatcaacgccgatggcaccgtgacctacacgcctgacgcgggcttcacgggc
acagacacgtttgactacacaatcacggaccctgcaggcaacgaaagcactgcgacggtg
acggttatggtccaagacccagcaatgccagacggtattgtgtcgggcacgcctaatgat
gatttgattgatacagggtacacgggtgatcctgatggcgaccttattgacgccaatgac
caaattattcctggtgaggatgtgaacgacgatatcgttcgtgcgggcgacggtgccgat
acggtgcttgcgggcgacggcgacgacgatgttcagggcggcacaggtgatgacgacctc
agcggcgaagcgggcgatgactcgctctttggcgaagagggcaatgacatcatcgacggc
ggcgacggcgacgacaccatcgatggtggggacggacgcgacagtgttggcggcggcgat
ggcaatgatgtgatcgacacatcaggctctgatccgctcattgacgaacaggtcttccct
ggtttgccagtggattccgatcctgaagatgaccgtgacaacgtaagtggcggtgcaggg
gatgatatcatccgcacaggcgacgaccgtgacaccatcacaggtggcacaggtgacgac
acgatttttgcgggcattgacgatgacgaggtcttcggcaacgaaggcaacgacagcatt
gtcgacatccagggcgccgactttatcgtaggtggtgacggcgacgacactatcgaagcg
ggcacaaacaccttctccgattatattggcgacgatcccaacctgccggttgcgggcttc
cctgatatcttgactgatccaaacaccacagatggccttgatactgtctttggcggcgcg
ggcaacgatgtcatctcgacgggcgatgatgccgatgagattgatggtggcacgggcaac
gatacgatcgatggtggtatcgatgatgatacgatcacaggcggcacaggcgatgatagc
atcatcggtcagcacggtgcggacagtatctttggcaacgatggcgacgatttcatcaac
gcgggtggcagcacctatggcggcaacgagcctgatgcgactgatatcctgccagagaac
gaccgtgactttgcagacggtggcgcgggcaatgatacgatctttggtgaagatgacgac
gacacgctgattggtggtgacggcgatgacttccttgacggtggcatcgacgaagacagt
ctgactggtggaaatggctcagacacgggcattggcgggcagggcgatgactttatcgac
ctctcgggcttccttgaggaacctgactcgacagatccaaaccctggcaatgaccgcgat
cttgccgaaggcggcgacggcaacgatgtgatcgacagctcgggtggcgataacctgact
gacgatgtggacacggacccagaagatgaccgcgacagcattattggtgggaacggcgac
gacaccatcaccacgggcgacgacgatgacacgatcgtttcgggcgcgggcaatgatgtg
gttgacgcgggcattgatgatgaccttgtgacgacaggcgacggttcggacactgttttg
ggtggtcaaggcaacgatacgattgacacatcaggcagcttcctgccgctgatcgatgaa
gccgatccattcccagacaacgaccgtgactctgttgatgcgggcgctggcgatgatgtg
atcaccacaggcgacgacgacgacaccgtcatcggcggcgcaggggatgacacaatcgac
acgggcatcgacgatgaccttgtggacgcaggcgacggcaacgacagcgtcattgcaggc
caaggcaacgatacggttgttgcgggggctggtgatgatacggttgacggcggcgacggc
gacgacagcatcattggcggtgacggatgtgacgtggtggatgcgggagccggaaacgac
ttcatcgacacctcagatccgagcccaatccttgatgcgacggatccgaacccgcttgac
gactgtgactcggtcattgggggcgctggcaacgatacgatccttacgggcgacgacgct
gatacaatctttggcggacttggcgatgatctgatcgacgcgggcatcgacaacgacctg
gttgacggcggtgctggcaatgacacgatcgacgctggcgaaggcgatgatgttgtagac
ggtggcgctggtgatgacagcatccttgggggtcttggtgccgatacgctcttgggcggt
gatggtcaggattacttcggcgcaatcacaggcggtgatgttgtagatggcggcgatggc
cctgctggtgagcggccaaaccccgactttgaccctgctttgcctatcagtgcggagaac
ccggagtttgttccgaatgactttgacacattggatctgaccggtgcggccgaggcgaac
aatccaggcggaagcttgaatatcatctacacctcggatgatcgtgaagatgggattgtc
gaattccgcgatgcggacggcaacgtaacctcaacgatggcctttgaagaaatcgagaac
gtcgtgccttgctttacgcccggcacagcgatcgcgacaccgcggggcgagcgccttgtg
gaagacctcaaggtcggtgacaagatcatcacgcgggacaacggcattcaggaaatccgt
tggatgggacagaagacgctttcggggcatgagcttgctcgctcgcccaacctgcgcccg
atcctcatccagaagggcgctcttggtaacaacctgccagagcatgacattcttgtcagc
ccgcagcaccggatcttgatcaataacgagcgcacctcgctttactttgaggagacagaa
gtgctcgcagctgccaagcacctcaccgagctcaaaggggtcgatgaagtggggacgctg
ggtgtcacctatgtgcactttatgttcgacaaccacgaggttgttctgagcaacggggca
tggaccgagagcttccaacctggtcagtcggtgatcgacgggttgggcacagagcaacgc
gacgaaatcttccagctcttcccagagctgaagacagaagagggtatcaaagactacacc
gccgcccgccgcgctctgaagaagcacgaagccaaactgctggttcggtaa
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