Lentibacter algarum: LentiSH36_01876
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Entry
LentiSH36_01876 CDS
T09071
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lalg
Lentibacter algarum
Pathway
lalg03410
Base excision repair
lalg03430
Mismatch repair
lalg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lalg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LentiSH36_01876 (recJ)
03430 Mismatch repair
LentiSH36_01876 (recJ)
03440 Homologous recombination
LentiSH36_01876 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lalg03400
]
LentiSH36_01876 (recJ)
DNA repair and recombination proteins [BR:
lalg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LentiSH36_01876 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LentiSH36_01876 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LentiSH36_01876 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WIF32332
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All DBs
Position
1887914..1889656
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AA seq
580 aa
AA seq
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MAFLGVETSLTGRKWLGPTVELERAAELIVQDTDLPRALAQVLARRGVGAQEAASFLAPQ
LRDLMPDPRSLKDMERASARIVRALDGRERVAIFADYDVDGGTSAALLIDWFRALGHDAT
LYVPDRIDEGYGPNAPAMEMLAADHSLIICVDCGTLSHEALAAATGTDIIVLDHHLGGET
LPPALAVVNPNRQDETGDLAHLCAAAVVFLTLVDAGRILRERGDKGPDLISMLDLVALAT
VADVAPLIGVNRAFVVQGLKIMARRARIGLVALSDVGRLDTAPKAYHLGFVLGPRINAGG
RIGQADLGARLLSCRDPHEASALAEKLDMLNSERRAIEEEVRAAALAQAEERGFDAPLVW
AAGEGWHAGVVGIVASRLKEATGRPAVVIGFDGDEGKGSGRSVSGIDLGASIQRLAMDGM
IEKGGGHKMAAGLSLSREQLEPAMARLSELLDKQGAGALGPSDLKLDGALMPGAANQHLV
EQLDDAGPYGASAAGPRFAFPDCVIHFAKQIGTGHLKITFSDGTGPRLEAIAFGAFDTAL
GPTLQNHGGARFHLAGRLELNTWQGRTSVQLRLDDAAPAH
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcatttttaggcgttgagacttccctgacagggcgcaaatggctcgggccaacagtc
gagcttgagcgcgccgcagagctgatcgtacaagacaccgacctgccccgcgcactggcg
caagtccttgcgcgtcgtggtgtgggcgcacaggaggccgcaagcttcctcgcgccccaa
ctgcgcgacctcatgccagatccgcgctccctgaaagacatggagcgcgcctccgcacgc
atcgtgcgcgctctcgatggccgcgaacgtgtggccatttttgccgattatgatgtcgac
ggcggaacgtctgccgcgctgctcatcgactggtttcgcgcattggggcatgatgcaacc
ctctatgtccctgaccggattgacgaaggctacggccccaacgctcccgccatggaaatg
ctggcagcggaccattcgctcattatctgtgttgattgtggaacgctcagccatgaagcg
ctcgctgccgcaacaggcacagatatcatcgtgctagatcaccacctcggcggcgaaacg
cttccccccgctctcgctgtggtcaacccgaacaggcaagacgagacaggcgatctcgcc
catctctgcgctgccgccgtggtctttctcacactggtcgatgcaggccgtatcctgcgc
gagcgcggtgacaaaggcccagacctgatctctatgcttgatctcgtcgcgctggccaca
gtggccgatgtcgcgccccttatcggcgtaaaccgcgcctttgtggtacagggcctgaaa
atcatggcccgccgtgcgcgcattggtcttgtcgcgctgtcagatgtgggccgccttgat
actgcgcccaaagcctatcacctcggattcgtcctcggcccgcggatcaacgcaggcggg
cgcatcggccaagccgaccttggcgcacggctgctgtcctgccgagaccctcacgaagcc
agcgcgctggccgaaaagctcgacatgctcaattctgagcgccgcgcgattgaagaagaa
gtccgcgccgccgccctcgctcaagccgaagagcgcggctttgacgcccctctcgtctgg
gccgcaggtgaaggctggcacgcgggcgttgtcggtatcgtcgcctcccgcctcaaagaa
gccacaggccgtcccgctgttgtgatcggctttgatggtgacgagggcaaaggctctggc
cgctccgtctcaggcatcgacctcggcgcaagcatccagcgcctcgccatggacggcatg
atcgagaaaggaggcggacacaaaatggccgctggcctctcgctcagccgtgaacagctt
gagcctgcaatggcccgcctttcggagcttctggacaaacaaggcgcaggcgcgctcggt
ccatcagacctaaaacttgacggcgcattgatgcccggagccgccaaccaacatcttgtc
gagcagctcgacgatgctggtccctacggtgcgtctgccgctggtccccgctttgccttt
cccgattgcgtaattcacttcgccaagcagatcggtacggggcatcttaaaattacgttc
tctgacggcacgggcccacgccttgaagccatcgcctttggcgcctttgatacagccctc
gggcccacccttcagaatcacggcggtgcacggtttcatctcgcaggacggctcgagttg
aacacatggcagggtcgcaccagcgtgcaactgcgccttgacgacgccgcacccgcgcac
tga
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