Lentibacter algarum: LentiSH36_02652
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Entry
LentiSH36_02652 CDS
T09071
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lalg
Lentibacter algarum
Brite
KEGG Orthology (KO) [BR:
lalg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lalg03016
]
LentiSH36_02652
Enzymes [BR:
lalg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LentiSH36_02652
Transfer RNA biogenesis [BR:
lalg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LentiSH36_02652
Prokaryotic type
LentiSH36_02652
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WIF33074
LinkDB
All DBs
Position
complement(2620354..2621259)
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AA seq
301 aa
AA seq
DB search
MGRKRKGRDISGWLVVDKPAGPTSTAVVNKVRWALGAAKAGHAGTLDPEATGVLAVALGE
ATKTVPFITDALKAYVFDVKLGEATNTDDAEGEVIATSEARPTDEEIKEALLKFVGDIEQ
VPPKFSAVKVDGQRAYKLSRAGEDVTLEARPLYVDELTMVERTDADHVRLEMVCGKGGYV
RSIARDLGEALGCKGHVLRLRRVWSGPFEAEKGLSYEQIEEMAKTPELESYIQPLEMGLE
DLPEVKATAEGAAKLRNGNPGMVFASDAEYGDECWASLDGRAVAVGIYKAGELHPSRVFN
Q
NT seq
906 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcaaacgcaaagggcgcgatatttcgggctggctcgtggtggataaacctgcg
gggccgacatcaaccgctgtggtgaacaaggtgcgctgggcgcttggtgctgccaaggcg
ggccatgctggcacgcttgaccccgaggcgacaggcgttttggccgtggcgctgggggag
gcgacgaagacggttcctttcatcactgatgctctgaaggcctatgtgtttgatgtgaag
cttggcgaagcgaccaataccgacgacgctgaaggcgaagtgattgccacctcggaggcg
cggccaacagacgaagagatcaaggaagcgctgctgaaatttgtcggcgacatcgaacag
gttccgccgaagttttccgccgttaaggtcgacgggcagcgcgcttataagctttctcgt
gcgggcgaggatgtgacgcttgaagcacggcctttgtatgtggatgagctgaccatggtg
gagcgtacggacgctgaccatgtgcggctggaaatggtctgtggcaaaggcggctatgtg
cgctctatcgcgcgcgatctgggcgaagcgctcggctgtaaggggcatgttctgcgcctg
cgtagggtctggtctggaccgtttgaagccgaaaaaggcctgagctatgagcagattgaa
gaaatggcgaagacgccagaacttgagagctatatccagccgcttgagatgggacttgag
gacttgcccgaagtaaaagccaccgcagaaggcgcggccaagctgcgcaacggcaaccct
ggaatggtttttgccagtgatgcggaatacggcgacgaatgctgggcgagccttgacggc
agggctgtggccgtgggtatatataaagcgggcgaattgcacccgagccgtgtgtttaac
cagtga
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