Lentibacter algarum: LentiSH36_02857
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Entry
LentiSH36_02857 CDS
T09071
Name
(GenBank) putative 3'-5'-exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
lalg
Lentibacter algarum
Brite
KEGG Orthology (KO) [BR:
lalg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lalg03016
]
LentiSH36_02857
Enzymes [BR:
lalg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LentiSH36_02857
Transfer RNA biogenesis [BR:
lalg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LentiSH36_02857
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
Type_III_SycN
Motif
Other DBs
NCBI-ProteinID:
WIF33272
LinkDB
All DBs
Position
2821152..2821766
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AA seq
204 aa
AA seq
DB search
MTNHLYKNDLPDGLDLGPIVAIDCETMGLHPHRDRLCVVQMSSGDGHAHLVQVAQGQTEA
PNLCAMLTDPNVLKLFHFGRFDIAALQNTFGALTAPVYCTKIASRLVRTYTDRHGLKNLL
QELLNEDISKQQQSSDWGADTLTKAQIDYAASDVLHLHKLRDKLDVMLAREGRDELAQAC
FRFLPTRALLDLEGWPETDIFAHA
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatcatctatataaaaacgatcttcccgatggccttgatcttggtcctattgtt
gcgattgattgtgaaactatgggcttgcacccgcatcgtgacaggctttgtgttgttcag
atgtcttccggtgatgggcatgctcatcttgttcaggtcgctcaaggccagacagaagcg
cccaatctttgtgctatgctcactgatcccaacgttctcaagcttttccattttggtcgt
tttgacatcgccgctctgcaaaatacctttggcgccctgacagcgccggtttattgcacc
aaaatcgcaagccgccttgtccgcacatatacagaccgacatggtctcaaaaacctgctc
caagagctgctgaatgaagatatttccaagcagcaacaaagctctgactggggcgccgac
acgctcaccaaggcgcagatcgactatgcggcctccgatgttcttcatctgcacaagctg
cgggacaagcttgatgtgatgctagcccgcgaaggccgtgacgagctcgcacaagcgtgt
ttccgcttcttacccacgcgtgccttgcttgatctggaaggttggccagaaacagatatc
ttcgcccacgcgtaa
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