Companilactobacillus alimentarius: LA20249_01745
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Entry
LA20249_01745 CDS
T05458
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lali
Companilactobacillus alimentarius
Pathway
lali03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lali00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LA20249_01745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lali03400
]
LA20249_01745
Enzymes [BR:
lali01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LA20249_01745
DNA repair and recombination proteins [BR:
lali03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LA20249_01745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
PIF1
AAA_22
nSTAND3
Herpes_Helicase
HHH_5
UvrD-helicase
AAA_29
SLFN-g3_helicase
RsgA_GTPase
AAA_12
AAA
AAA_17
UvrD_C
AAA_28
AAA_16
T2SSE
NPHP3_N
NTPase_1
AAA_23
AAA_7
RuvB_N
DUF4926
Mg_chelatase
TsaE
ABC_tran
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AUI70998
UniProt:
A0A2K9HF52
LinkDB
All DBs
Position
336128..338512
Genome browser
AA seq
794 aa
AA seq
DB search
MAESNKQYFVGTVKAIFFENPENLFKIFTIKIKKTNTDWDAGDIVVTGSFGEISEEEEYR
FEGHMVDHPKYGKQFQATSYKRSLPSGRKELISFFSSDEFPGIGKKKAEKIVDKLGNNAI
DKILQDPHALDFLKLGEEKTNTIVEQISKNHQTEQVLYQLNNYSFGSTLSARIYQKYGVQ
TLEKLNDDPYQLVLDVKGVGFKRADELAKKLGITGDDPRRIKGALIQMVSLMINETGDTF
VLQTELIKRVSGVLNTNSTPDLNKKLLDGLKKLVNDGVLLVEDGHVYDKGLSDSEWSIAQ
SLKMITDTFKGVSWTKHQFKKELKHVEKSFSVQYDKSQERAIEQSLTHSVFLLTGGPGTG
KTTIINAIVSAYAKLNDATLDPASEDYAIALAAPTGRAAKHMGESTGLPAMTIHRLLGLT
GTEDDEFAEPTLDCKLLIIDEMSMVDTKLFRTLIDAVQPGTQVVLVGDKDQLPSVGAGQV
FSDLINSQVFPTTILKEIHRQDEDSTIIQLAHDINEGVIVDGIFQNRADRSFINCNSRNV
PEVLSQIISKSSERGFDIADVQVLAPMYRGQAGIDNLNVVIQNVVNPMAPKRKEVSVGNT
KYRINDKVVYLVNTPEDNVFNGEIGKIVGIILAKENTDHVDRLVIDFDGNEVTLDRKDWL
NISLAYCTSIHKAQGSEFEMVILPLVNEESRMLRRNLLYTAVTRSKRLLIMVGDRQAFER
SIRDQSNERQTTLKERIFASFKVKPQETVSENKDEVTEPKDYHLTLDMVMNNSIDPMIGM
DNVTPYNFLEKNNA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaagtaataagcagtattttgttggtactgttaaagccatcttttttgagaat
ccagagaatttatttaagatttttacgattaagattaagaagaccaatacggattgggat
gctggcgatattgtcgtaactggtagttttggtgaaatctccgaagaagaagaatatcgt
tttgaaggccatatggtggatcatcctaagtatggaaaacaatttcaggccacttcttac
aaaaggagtttgcccagtggtcgtaaggaattgattagttttttctccagtgatgaattt
cccggaattgggaagaaaaaagctgaaaaaatcgtcgataaactcggtaacaacgcaatc
gataaaatcttacaagatccacatgctttggattttctaaaattgggtgaagaaaaaact
aatactatcgttgaacaaatttccaagaaccatcagacagaacaagttctataccaatta
aataattatagctttggtagtactttaagtgcccgtatttatcaaaaatatggtgtgcag
acattagaaaaattgaatgatgatccttatcaattagttttggatgttaaaggtgtcggt
ttcaaacgagcagatgaattagccaaaaaattaggcattactggcgatgaccctcgcaga
atcaagggtgctttaattcagatggtcagtttgatgatcaatgagactggagataccttc
gttttacaaacagagcttataaagcgtgtcagcggtgttttgaatactaactcaacaccc
gatttaaataagaaattactagatggtttgaaaaaactagtcaacgatggcgtgctgttg
gttgaagatggtcatgtgtatgacaaaggactatctgatagcgaatggtcgattgcccaa
tctttgaaaatgattactgacactttcaagggtgtttcctggacaaagcatcaatttaaa
aaagaactcaagcacgttgaaaagtcattttcagttcaatatgataaatcgcaggaaagg
gctattgaacaatcgttaactcattcagtttttcttttgactggtggaccgggaactggt
aagacaacgattattaatgcaatcgtatctgcatatgctaagctaaacgatgcaacttta
gacccagcttcagaagattacgcgattgctctagcagctccaacaggaagggctgccaaa
catatgggtgaatccactggtttaccagctatgacgattcatcgattgttaggtttgacg
ggaacagaggatgatgagtttgctgagccaactttggattgcaagcttttgattattgat
gagatgtcgatggttgatactaaattgtttaggaccttgattgatgcagtacagccagga
acacaggtggttttagttggtgataaggatcagttgccctcagttggggcgggtcaagtc
ttctctgatttgattaacagtcaagtatttcccacgacaattttaaaggagattcaccga
caagatgaagattcaacgattattcaattagctcacgacattaatgagggcgtgattgtt
gatgggatttttcaaaatagagctgatcgtagttttattaattgcaatagtcgaaatgta
ccagaagttctatcgcagatcatcagtaaatcaagtgaacgtggtttcgatattgctgat
gtacaagttttggccccgatgtatcgaggacaagcaggtatcgacaacttaaatgtcgtg
attcaaaatgtggtcaacccaatggcacctaaaagaaaagaagtttccgtaggcaatact
aagtatcggatcaatgataaagtagtttatttggtcaatacaccggaagacaatgttttt
aatggtgagattgggaaaattgttgggataatcttggctaaggagaatactgatcacgtt
gatagattggtgattgattttgacggcaacgaggttactttggatcgaaaagattggcta
aatatttctttagcctattgtacttcgatccataaagctcaggggtctgaatttgagatg
gttattctacctttggtcaatgaggaatcaagaatgttaaggcgaaaccttttatatact
gcagtaacaaggtctaaacgtttactgattatggtaggagaccgtcaagcttttgaacgt
tctattagagatcaatcaaatgagcgtcaaactactttaaaggaacgtatttttgctagt
tttaaagtcaaacctcaagaaacagtttctgaaaataaagatgaagtaactgaacctaaa
gattatcatttgactttagatatggtgatgaataattcgattgatccaatgattgggatg
gataatgtgacaccatataattttctagaaaaaaataacgcttaa
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