Companilactobacillus alimentarius: LA20249_02310
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Entry
LA20249_02310 CDS
T05458
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lali
Companilactobacillus alimentarius
Pathway
lali03030
DNA replication
lali03430
Mismatch repair
lali03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lali00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LA20249_02310
03430 Mismatch repair
LA20249_02310
03440 Homologous recombination
LA20249_02310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lali03032
]
LA20249_02310
03400 DNA repair and recombination proteins [BR:
lali03400
]
LA20249_02310
Enzymes [BR:
lali01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LA20249_02310
DNA replication proteins [BR:
lali03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LA20249_02310
DNA repair and recombination proteins [BR:
lali03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LA20249_02310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AUI71102
UniProt:
A0A2K9HP80
LinkDB
All DBs
Position
458269..461592
Genome browser
AA seq
1107 aa
AA seq
DB search
MQAQLQVVSSYSLLHSPAKITEIVDQAKQRGYQAIALTDLNNLYGSIDFYKYAKKIGIKP
IIGLTIETSGLIDQENSYPLILLAKNQQGYQNLIKLSSAVMSNKEPISLTNLQPYLNNLF
VITPGSDSELTSVSERQDYLKKLSSLLDDNSLYLGVGLYSEQIDNVKTIRDMSNDYLPLV
ALGDVRYINPDDHMAYQVVNFLRTGQRFENLEQVVESGDHYLRTAEEFEQDFVKVDMESA
IANAQKIADQCNVEIEFKETELPQFDTPMGQSSIQFLTDLTNKGLEKRLNNHISTDYQGR
LNYELGVIDKMGFSDYFLIVWDVIKHAHEIGIKTGPGRGSAAGSLVSYCLGITQVDPIKY
DLLFERFLNPQRANMPDIDLDLPDNRRDEMVMYMHDKYGSDHMAQIITFGTLAAKMALRD
IARTFSQTQFQMSQWSNAIPRKLNITLQESFDESSTLRNIVNDSRENKLIYQVATRLEGI
PRHYSTHAAGIILSKKKMTDIVAVQLEDDGINLTQQTKYNVESLGLLKIDFLGLKNLTIL
DQAIQAISKKYGRKFIAERIPLNDPQTLRLFQRGETDGVFQFESDGIKSVLRQLVPSSFD
DIVATNALYRPGPMQNIATFIARKHGQEPVTYPDSSLEKILQPTYGILVYQEQVMQASSR
MAGFSLAEADILRRAISKKNEKLIEENRQKFVDGSVAQGHDKESAQKVYQYIEKFGNYGF
NKSHAVAYSMIAFWLAYIKVHFTDIFFACLLNSNLNNETKVATYVQDAKDRQVKILNVDI
NQSSLEFNAEKKSIRFGILSIKGMRRDLAREIVEQRQKNGSYTSALNFLQRIDRRFIKED
YLEPLILAGAFDSFNQNRKELLFDFRDLIESIQLAGSNLSLFDILDPKKHEVDDFTLTER
LNQEKEYLGVYVSGHPVEKYRSRILNTKTVKIAELGNFQGMRTNVLGLVKNLRVIRTKKG
QRMCFMTIEDESGSISVTIFPKVFQKIENLELDGKIFLFVGHSNVGQRGDLELIADRLSD
PKQFTVQLPKDKLYLRVTKDLDTPDNLEKLYQIIEHFPGPMPVIVYREKKRQALLLKSNR
WIGFNSNVQSQLEDFLGKKSVFVKKDH
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
ttgcaagcgcaattacaagttgttagtagttacagtttgttgcatagtcccgctaaaata
acggaaatagtagatcaggcaaaacagcgtggttatcaggcgattgctttgacggatcta
aataatttatatggctcaattgatttttataaatatgccaagaaaattggtattaaaccg
atcattggcttgaccattgagacaagtggtttaattgatcaagaaaatagttacccacta
atcttattggctaaaaatcaacagggctatcagaatttgatcaaactttcttcagcggtt
atgtctaataaagagccaatttcactaactaatttacagccatatctgaataatctattt
gtgatcacgccaggtagcgattctgaattgaccagtgtgtctgaacggcaagattaccta
aagaaattgagcagcttgttggatgataattctctttatttaggtgtcggactttattca
gaacagattgacaatgtaaaaacgattagagacatgtctaatgattatttacctttagtg
gctttaggagatgttagatatattaatccagatgatcacatggcttatcaagttgtcaat
tttttgcgaacaggtcaaagatttgaaaacttagaacaagtcgttgaatccggtgatcat
tatttaagaacagctgaagaatttgagcaggattttgttaaggtcgatatggaatctgca
attgcaaatgcacaaaagatagccgatcagtgcaacgttgagattgaatttaaggaaact
gaattgccacagtttgatacaccgatgggtcaaagttcaattcaatttttaactgatttg
actaataagggcttagaaaaacgattgaataatcatatatcaactgattatcaaggacga
ttgaattatgaattaggcgtgattgataaaatgggcttctcagactattttttaattgtt
tgggatgttatcaagcatgctcatgaaattggcattaaaactggtcctggacgtggttct
gcggcaggttcactagtatcatattgtttaggaataacgcaagtcgatccaatcaaatat
gatcttttgtttgaacgtttcttgaatccacaacgtgccaatatgcctgatattgattta
gatctacctgacaatcgtcgagatgagatggttatgtacatgcatgataagtatggttca
gaccatatggctcagatcattacttttggaactttagcggcaaagatggccttaagggat
attgctcggacatttagtcaaacgcaatttcagatgtcgcagtggtcgaatgcgattccc
cgtaaactcaatattactttgcaagagtcttttgacgaatcgagtactctacgaaatata
gttaatgattcacgtgagaataaactgatttatcaagttgctacaaggcttgaaggaatt
cctagacactattcgactcatgcggcaggaattattttgagtaagaagaaaatgactgat
attgttgcggtgcaactggaagatgatggtatcaatctgactcagcaaacaaagtataat
gttgaaagtcttggtttgttgaaaatcgattttttaggattaaaaaatttaactatctta
gaccaagcgattcaagctatttcaaaaaagtatggacgcaagtttattgctgaaagaatc
cccttgaatgatccgcaaacactgcgattgtttcaacgtggtgagaccgatggggtcttt
caatttgaatctgatggaatcaaaagtgttttaaggcaattagtaccatcgagttttgat
gatattgttgcgactaatgctttgtatcgtcccggtcctatgcaaaacattgctactttt
atcgctagaaagcatggtcaagaaccggtaacctatccagacagttctttggaaaaaata
ttgcaaccaacttatggaattttagtttatcaggagcaagtaatgcaggcttcttcaaga
atggctggtttttctttggctgaagctgatattttacgacgtgctattagtaagaagaat
gaaaaattaattgaagaaaatcgtcagaagtttgttgatggttccgttgcccaaggacat
gataaagaatccgctcaaaaggtttatcaatatattgagaaatttggtaattatggtttc
aataaatcccacgcggttgcttattcaatgattgccttttggttggcctatatcaaagtt
cattttacggatatcttttttgcgtgtttgttgaattctaatttgaataatgagacgaaa
gttgcaacatatgttcaggatgcaaaggatcgacaggttaagattctaaacgttgacatc
aatcaaagctctttagagtttaatgctgaaaagaagtcgattcgttttggaatcttaagc
attaaaggaatgcgacgtgatctagctagagagattgttgaacagcgtcaaaaaaacggt
tcatatacaagtgcattgaatttcttgcaacggattgatcgccgtttcatcaaggaagac
tatttggagcctttaatcttggcaggggcctttgattcatttaatcaaaatcgaaaagaa
ttactatttgattttcgtgatctaattgaaagtattcaattggctggtagtaatttgtcc
ttgtttgacattttggatcccaagaaacatgaagtggatgattttactttaactgaacgt
ctcaatcaggagaaggaatatttaggagtctatgtttcaggtcatcctgttgaaaaatat
cggagtcgaatcttaaatactaaaacggtaaaaatagctgaacttggtaattttcaaggg
atgaggactaacgttttaggattggtcaagaatttacgtgtgattcggactaaaaagggt
cagagaatgtgttttatgacgattgaagatgaatctggcagtatttctgtaactattttt
ccaaaagtttttcaaaaaattgaaaatctggaattggatggtaaaatatttctctttgtt
ggacacagtaatgttggtcaaagaggagatttagaattgattgctgatcgactgtcagat
cctaaacaattcacagtccaattgcccaaagataaactgtatttaagagttaccaaagat
ttagatactcctgacaatttggagaaattgtatcaaattatcgaacattttccgggacct
atgccggtgattgtctatcgagagaaaaaacgtcaagcgttactgttgaaatctaatcga
tggataggttttaatagtaacgtacagagtcaactggaagactttttaggtaaaaaaagt
gttttcgtaaaaaaagaccactaa
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