Companilactobacillus alimentarius: LA20249_02490
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Entry
LA20249_02490 CDS
T05458
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lali
Companilactobacillus alimentarius
Brite
KEGG Orthology (KO) [BR:
lali00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lali03032
]
LA20249_02490
03400 DNA repair and recombination proteins [BR:
lali03400
]
LA20249_02490
Enzymes [BR:
lali01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LA20249_02490
DNA replication proteins [BR:
lali03032
]
Prokaryotic type
DNA Topoisomerases
LA20249_02490
DNA repair and recombination proteins [BR:
lali03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LA20249_02490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AUI71135
UniProt:
A0A2K9HK33
LinkDB
All DBs
Position
496681..498765
Genome browser
AA seq
694 aa
AA seq
DB search
MPSTQKNLVIVESPSKAKTIEKYLGRNYHVVASLGHVRDLPKSQMGVDIEHNYEPKYISI
RGKGPVIKDLKKEAKKAKRVYLAADPDREGEAIAWHVSHLLGLDDQDKNRVVFNEITKDK
VKQAFKTPRTIDMKLVDAQQARRVLDRLVGYSISPILWAKVKKGLSAGRVQSIALKLVIE
KENDIKKFVPQEYWTIESTFKHGKDKFKANFYGLDGKKAELNSNAQVQDVLGKIDKKSDF
NVDKVTKKERKRFPAAPFTTSSLQQEANKRLNYKTRKTMMIAQQLYEGINLGRKEGTVGL
ITYMRTDSKRISKVAEAEASKFIHEEYGERFATIKERKDKNQEGAQDAHEAIRPSSVMRT
PKSLKDILSRDQYRLYNLIWSRFVASQMTPAIFDTMTVDLSQNGVMFRANGSKMKFEGYR
KVYQSTSESSKKDNILPDIVENDKAKLQTNDPAQHFTQPPARFTEASLVKALEENGVGRP
STYSPTIDTIQRRYYVKLNGKSFEPTELGEIVDNLIQNYFPDIVNIDFTANLEDELDHIE
EGKEDWVKVVDRYYKPFAKELESAEDKIEKVQIKDEPAGMDCDICGAPMVIKMGRYGKFY
ACSRFPDCRNTKPIVKEIGVVCPKCKKGQVIERKSKKNRIFYGCSRYPDCDFVSWDKPIG
RDCPKDGHYLVEKKVKGGRQVICPNGDYEEDIQK
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
gtgccatcaacacaaaagaatttggtgatcgttgaatcaccatcaaaagctaaaacaatt
gaaaagtatttgggacgtaattatcacgtggttgcaagcttaggtcatgttcgtgattta
cctaagagtcaaatgggtgtcgatattgaacataactatgagccaaagtatatttccatt
cgtggtaagggtccagtaatcaaagatttaaaaaaggaagctaaaaaagctaaacgagtt
tatctggcagccgatccggatcgtgaaggggaagccattgcttggcacgtctcacacctt
ctaggattagatgatcaagataaaaatcgagttgtttttaatgaaattactaaggataaa
gtaaagcaagcatttaaaacacctcggacgattgatatgaaactagtagacgcccaacag
gcaagacgtgttctggatcgtttagtcggttattctatttctcctatcctttgggctaaa
gttaaaaagggtctgagtgccggacgagttcaatcgattgctttgaaattagtgattgaa
aaagaaaatgatattaaaaaattcgtcccacaagaatattggacgattgaatctactttt
aaacatggtaaggataaattcaaagctaatttctatggtttagatggtaaaaaagctgaa
ttgaacagtaatgctcaagtacaagatgttttaggaaaaattgataaaaagtcagacttt
aacgttgataaagttactaaaaaagaacgtaagagattcccggctgcaccattcacaact
agttccctacaacaggaagccaataagcgtttaaattataaaactagaaaaacaatgatg
attgctcaacagttgtacgaaggaatcaatttaggtcgcaaagaaggtactgtaggttta
atcacatacatgcgtaccgattctaagcggatctcaaaagttgctgaagctgaagcttct
aagtttattcatgaagaatatggcgagcgttttgctacaataaaagaacgtaaggataag
aatcaagaaggtgctcaagatgcccatgaagctatccgcccatcttcagtaatgagaact
cctaaatcattgaaggatattttaagtcgtgatcaatatcgtttatataatttgatctgg
tcaagatttgttgctagtcaaatgacaccagcaatttttgatacgatgacggtcgatctt
tcacaaaatggtgttatgttcagggctaatggttctaagatgaaattcgaaggttatcga
aaagtttatcaaagtacttctgaaagtagtaagaaagataatattttaccggacattgtc
gaaaatgataaagctaagttgcagacaaatgatccagctcaacactttactcaaccgcca
gcacgctttactgaggcttcacttgttaaagctttggaagaaaatggtgtcggtcgtcct
tctacttattcaccaactattgataccattcaacgtcgttattacgtcaagctcaacggt
aagagttttgaacctactgaattaggtgaaatcgttgataatttaattcaaaattacttc
cccgatatcgtaaatattgattttacggctaacttggaagatgaattggatcatattgaa
gaaggtaaagaggattgggtcaaagtagttgatcgttattacaagccttttgctaaagag
ttagaatctgctgaagacaagattgaaaaggtacagatcaaagatgagcccgcagggatg
gattgtgatatctgtggggcaccaatggtaatcaagatgggaagatatggtaaattctat
gcctgttctagattcccagattgtcgtaatactaagccaattgttaaagaaattggagtt
gtttgtcctaagtgtaagaagggacaagtcatcgaaaggaaatcaaagaagaatcggatt
ttttatggttgttcacgctatcctgactgtgatttcgtttcatgggataagcctattgga
cgtgattgtcctaaggatggtcactatttagtagagaagaaagttaaaggtggtcgtcaa
gtaatctgtccaaatggagattatgaagaggatattcaaaaataa
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