Companilactobacillus alimentarius: LA20249_03245
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Entry
LA20249_03245 CDS
T05458
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
lali
Companilactobacillus alimentarius
Pathway
lali03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lali00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LA20249_03245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lali03400
]
LA20249_03245
Enzymes [BR:
lali01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
LA20249_03245
DNA repair and recombination proteins [BR:
lali03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LA20249_03245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AUI71271
UniProt:
A0A2K9HFD7
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All DBs
Position
complement(666120..667028)
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AA seq
302 aa
AA seq
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MIIGSHVAMKAPKMLAGSAKEAHSYDANAMMIFTGAPQNTRRKDVSEMNIPEGQRLLKLY
GIDHIIGHAPYIINLGNTVKLQNLTFGISFMKEEIKRCDALGIEALSFHPGAHLNQGPEV
ALKQIGHALNEIIEPNQKVSIAIETMAGKGTEVGITFEQIAEIFDNCQSNDKLSVTMDTC
HMSDAGYDVKNDFDGVLNEFDHIVGLDKLSVIHLNDSKNERGSHKDRHEDIGFGTIGFDA
LNYVAHHPQLENIPKIMETPYVKRDENDKKGIAPFKPEIEMLRLNKFDPEMKTKLIQANQ
KS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgataattggttcacatgttgcgatgaaggcgcctaaaatgttggcaggatcagccaaa
gaagctcacagttacgatgcaaatgcgatgatgattttcactggtgcaccgcaaaatact
cgtcgaaaagatgtttcagaaatgaatattcctgaaggtcaacggcttttaaaactctac
ggaattgaccatataataggtcacgctccctacattattaatttgggcaatacggttaag
cttcagaatttaacttttgggatttcttttatgaaagaggagatcaaacgttgtgatgct
ttgggaattgaagccctgagttttcatccaggagctcatctcaatcaaggaccagaagtt
gctttgaaacaaattggtcacgctcttaatgaaataattgaacccaaccaaaaagtatca
attgctattgaaactatggcaggcaaagggacagaagtgggaatcacttttgaacaaatt
gcggaaatttttgataattgtcagagtaatgacaaattatcagtaacgatggatacttgt
catatgagtgatgcaggttatgatgtgaaaaatgattttgacggtgtcttgaatgaattt
gatcacatagttggattggataaactgtcagtgatccatctcaatgattctaaaaatgag
cgtggctcacataaagatcgtcatgaagatattggctttggaacgatcggtttcgatgct
ttaaattacgtggcacatcatcctcagttggaaaatattcccaaaattatggaaacacca
tatgtaaaaagggatgaaaacgacaagaaggggattgcacctttcaaaccggaaattgaa
atgttacgtttaaataaatttgatccagaaatgaaaactaaattaattcaagcaaatcaa
aaaagctaa
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