Companilactobacillus alimentarius: LA20249_04105
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Entry
LA20249_04105 CDS
T05458
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
lali
Companilactobacillus alimentarius
Pathway
lali03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lali00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LA20249_04105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lali03400
]
LA20249_04105
Enzymes [BR:
lali01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LA20249_04105
DNA repair and recombination proteins [BR:
lali03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LA20249_04105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF1548
Motif
Other DBs
NCBI-ProteinID:
AUI71427
UniProt:
A0A2K9HI97
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All DBs
Position
complement(851418..852767)
Genome browser
AA seq
449 aa
AA seq
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MDNEQYLTVTALTQYLKRKFDVDPYLGHVYLMGEISNFRMRPNAHQYFSLKDDKAKISAI
MFKSNFSKVKFQPEEGMKVLVKGRISLYEPSGSYQIYVESMEPDGLGALYLAFEQLKKKL
AQQGVFDLPKKAIPQFPKRIAVVTSQSGAVIHDIMTTVQRRFPIVQIVLYPAQVQGQEAA
PTIVKQLERINENGNYDTIIIGRGGGSIEDLWPFNEEIVAQAIVQSKIPVISSVGHETDT
TIADLVADLRAATPTAAAELATPVLRDVLAHLQDLNMRLYNAQTKIIGNYKDRVDSLAKN
VFLQHPERIYEVYLQKVDYLQDKLQQNFANSLSRSKTELIQYANRLVQSSPRDQIYSYGN
QVNRLYQILINNVNKVINKNRNIFNSEVASLDSLSPLKTLSRGFAIPVDKSGKVLRDVTD
YQVDQEVDLRVKNGNVKLVTKEVSEDKNG
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggataatgaacagtatttaaccgttacagctttaacacaatacttgaagagaaaattt
gacgtggacccttatttgggacacgtctatttgatgggcgagatatccaatttccgaatg
cgtcctaatgcccatcaatatttttcattaaaagatgataaagctaagatttcagcaatt
atgtttaagtctaattttagtaaagttaaatttcagcccgaagaaggaatgaaagttctc
gtcaaaggaagaatttcactttatgaaccgagtggttcttatcagatttatgtggaatca
atggaacctgacgggttaggagcgttatatttagcttttgagcaattaaaaaagaaactg
gcacaacagggtgtctttgatttgcctaaaaaagcgatccctcaatttcctaaacgaatt
gcagtggttactagtcagtccggagcggttattcatgatattatgacaacagtacaaaga
cgtttcccaatagttcaaatcgtcttgtatcctgctcaggttcaaggacaagaggcagca
ccaacgattgttaaacaacttgaacgaatcaatgagaacggaaattacgatacaattatt
attggtcgtggcggtggttcgattgaagatctgtggccttttaatgaagagatcgttgca
caagcaattgttcaaagtaaaattccggttattagttcagttggtcatgagactgatact
acgattgctgatttagttgctgatttaagagctgccacaccaacagctgctgctgaatta
gctacgcctgttttacgagatgtcctggctcatttgcaggatcttaatatgaggctctac
aatgctcaaactaagattattggtaactataaggatagagtcgattctttagctaagaat
gtatttttacagcatcctgagcgaatatacgaagtgtatcttcaaaaggttgactactta
caggataaacttcaacaaaattttgcaaactcattgagtagatctaaaacagaattgatt
caatatgctaaccgtttggtacagtcatctcccagagatcaaatctacagttatgggaat
caagtcaatcgtttatatcagattttgattaataatgtgaacaaagttatcaataaaaat
cgtaatatatttaatagtgaggttgctagtttagattctctgagcccccttaagacttta
agccgtggttttgcgattccggtggataaatcgggtaaagttttacgagatgtgacagat
tatcaagttgaccaagaggttgacctgagagttaaaaatggtaacgtcaagctagtaacc
aaagaagtaagtgaggataagaatggctga
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