Companilactobacillus alimentarius: LA20249_04395
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Entry
LA20249_04395 CDS
T05458
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lali
Companilactobacillus alimentarius
Pathway
lali03030
DNA replication
lali03410
Base excision repair
lali03420
Nucleotide excision repair
lali03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lali00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LA20249_04395
03410 Base excision repair
LA20249_04395
03420 Nucleotide excision repair
LA20249_04395
03440 Homologous recombination
LA20249_04395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lali03032
]
LA20249_04395
03400 DNA repair and recombination proteins [BR:
lali03400
]
LA20249_04395
Enzymes [BR:
lali01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LA20249_04395
DNA replication proteins [BR:
lali03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LA20249_04395
DNA repair and recombination proteins [BR:
lali03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LA20249_04395
NER (nucleotide excision repair)
GGR (global genome repair) factors
LA20249_04395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AUI71479
UniProt:
A0A2K9HG02
LinkDB
All DBs
Position
complement(900758..903415)
Genome browser
AA seq
885 aa
AA seq
DB search
MTQNKKLLLIDGNSVSFRAFFAMHNVLDKFVNGDGIHTNALYAFNNMLDLILKDEKPTHT
LVAFDAGKTTFRTEMFKEYKGTRAKTPPELMEQLPLIQDLLNYRGIKTYQLPNYEADDII
GTMSRKAEKDGMDVTIITGDRDLTQLTTDKVTVRVNVKGVTETESYTPKHVKEKLGITPQ
QIIDMKGLMGDNSDHYPGVEKVGEKTAIKLINQYGSMEDIYEHVDEMKKSKLKEHLIDDK
DQAFLSKKLATINCDSPVELNLSDLEYRGDNQEMLIQFYQKMNFQSFLERMDIKTEDSSK
DLVKIEVKELNDSAIKEIVESQKVHTLVVEGFGENYHTAPIIGILISDGQTYYGTTDVSV
LENQSLKTWLADKTKEKYLFDNKQTIALLHRYGCQLAGVSFDMLLVAYLLDTNDNKQDIG
LVAHNYNISLPTQEEFYGKGVKKAVPEDEKVLLNFLAQEAQVIDTLKDQMLAELKDNDQD
SLYDEIELPLSIVLAEMEIKGITVEASKLQEMENTFAKKLNEIEQKIYQEAGKEFNINSP
KQLGVVLFEDLKLPVIKKTKTGYSTSVDVLEKLKDKSPVVQMVLDYRQISKIQSTYVVGL
QKFIQPDNKIHTIYLQTLTQTGRLSSIEPNLQNIPIRIDEGKQIRKAFVPQHKDWEIFSA
DYSQVELRVLAHISGDEHMQEAFNEDYDIHAHTAMRIFGLNSTDEVTPNMRRQAKATNFG
IVYGISDYGLSQNIGISRKQAAAFIESYFEQYPGVKKYMDDIVKYARENGYVETIMHRRR
YLPDIHSKNFNMRNFAQRTAMNTPIQGSAADIIKVAMINMQKMLVKEKLQANLLLQVHDE
MIFEAPATEIATLEKLVPSVMDSAVKLDVPLKVETAHGKTWYEAK
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaaataaaaaattacttttaatagacggaaatagtgtatccttcagagcattt
ttcgccatgcacaacgtcttagataaatttgtcaacggggatggcattcataccaacgcc
ctgtatgctttcaacaatatgttggatttgattttaaaagatgaaaagccaacgcataca
ttggtggcatttgatgctggtaaaactacttttagaacagaaatgttcaaagaatacaaa
gggacacgtgcgaaaactccgccagaattaatggaacaattgccattgattcaagattta
ttaaattaccgaggaatcaagacgtatcagttgcctaattatgaagctgatgacatcatc
ggaactatgtcacgtaaagctgaaaaagatggcatggacgttaccatcattacaggggat
cgtgatttgactcaattgacgactgataaagttactgtacgtgtaaatgtcaaaggcgtg
acggagacggaaagttatactccaaaacatgtcaaagagaaattgggtattactccacaa
cagatcattgatatgaaaggtttaatgggtgataactctgatcattatcctggcgttgaa
aaagtcggtgaaaagactgctattaaattgatcaatcaatatggcagtatggaagatatt
tatgaacatgttgatgaaatgaagaagagcaaactaaaagagcatttgatcgacgataag
gaccaagcatttttaagtaaaaaattagctacgatcaattgtgattcgccggttgaatta
aatttgagcgatttggaatatcgtggagataatcaagaaatgttgattcaattttatcaa
aagatgaattttcaatcatttttggaaagaatggatattaagacagaagatagttcaaaa
gacctagttaaaattgaggtcaaagaattaaatgattcagcaattaaagagattgttgaa
agccaaaaagttcatactttggtcgtagaaggctttggagaaaactatcatacagcgcca
atcattggaattttaatttccgatggtcagacatactatggaacgactgatgtttcagtt
ttggaaaatcaatcactgaaaacttggctggctgataaaacaaaagagaagtatctcttt
gacaataagcagactatagcgttattgcatcgttatggctgtcagctcgctggggttagt
ttcgatatgttattagtggcctatttactagataccaatgacaacaaacaagacattggt
ttagtagctcacaattataatattagtttgccaacccaagaagagttctatggtaaaggt
gttaaaaaagccgttcctgaagatgaaaaagtattgttgaatttcctagctcaggaggct
caagttattgataccttgaaagatcagatgcttgctgaattaaaggataatgaccaagat
agcctttatgatgaaattgaattgccattatcaattgttttggctgaaatggaaattaag
ggtattacggttgaagcctccaaattacaggaaatggagaatacttttgcaaagaagctg
aatgaaattgagcaaaagatttatcaagaggcgggtaaagagtttaatattaactcgccc
aaacaactaggtgtcgttttatttgaagatttgaaattgcccgtgattaaaaagactaaa
acaggttattctacttcggtcgatgtcttagagaagttaaaggataagtctcctgtcgtt
cagatggttttagattatcgtcaaatttctaagattcaatcgacttatgtggttggatta
caaaagtttattcagccggataacaaaattcatacgatttatttacaaactttgacgcaa
accggacgtctatcttcaattgaacctaatctacaaaatattcctattagaattgatgaa
ggaaagcagatacgtaaggcttttgttcctcagcataaggattgggagattttttcagct
gattattcacaagtggaattacgcgtgttggcccatatttcaggagacgaacacatgcaa
gaggctttcaacgaggattacgatattcacgcacatacggctatgcggatctttggtttg
aatagtactgatgaagtgactcctaatatgcgtcgtcaagctaaagctactaactttggg
attgtttatggtatcagtgactatggtctgtcacaaaatatcggcattagtcgtaaacaa
gccgcagcttttattgagtcatatttcgaacaatatccaggcgttaaaaaatatatggat
gatattgttaaatatgcccgtgaaaatggttacgtggaaacaattatgcatcgtcgtcgc
tatttaccagatattcattcaaagaattttaatatgcgtaattttgcccaaagaacggct
atgaatacgccaattcagggtagtgctgcggatattattaaagtggcaatgatcaatatg
caaaagatgttagtaaaggaaaaattgcaagctaatctattgttgcaagtacatgatgaa
atgatttttgaagcaccggcgacagaaattgcaacattagagaaattagttccaagcgtc
atggattcagctgtaaaattggatgtacctttgaaagttgaaacggctcatggaaaaact
tggtacgaagctaaatag
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