Companilactobacillus alimentarius: LA20249_04475
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Entry
LA20249_04475 CDS
T05458
Name
(GenBank) 3'-5' exonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lali
Companilactobacillus alimentarius
Brite
KEGG Orthology (KO) [BR:
lali00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lali03019
]
LA20249_04475
Messenger RNA biogenesis [BR:
lali03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LA20249_04475
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AUI71495
UniProt:
A0A2K9HKQ5
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All DBs
Position
complement(915186..916121)
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AA seq
311 aa
AA seq
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MVKHIIDFNKGENMSLEVIIKRSDFRLAKNGKNFLSLVFEDKSGQIPGKYWDASEEDAKK
YHVGAIVQLEGRRDLYQGKPQVNITRLGLLDPQTVDMAQFVQTAPMKKSDMEDEFEDVFL
QITNGAWNRIVRYLFKKYHDRFFISAAAKSNHHDFQGGLAYHTLSMVRLAEKVADLYPQI
NRALLIAGACLHDFGKIVELTGNLDIEYTFEGNMLGHITIVDEEIVQAATDLQINLESED
MILLRHMILSHHGLLEYGSPERPKLLEAEVLHNIVMDASINMITKALTKTENGKFSERVF
GLDNRSFYKHS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggttaaacatattattgattttaacaaaggtgaaaacatgagtttggaagttatcatt
aagcgctcggattttcgcctagcaaaaaatgggaaaaactttttgtcattagtttttgaa
gataagtctggtcaaatccctggaaaatattgggatgcaagcgaagaagatgctaagaag
tatcatgttggggctattgtccaattagaaggtagaagagacctttatcaaggcaagccc
caagtgaatattactcgtttaggattacttgatccacagacggttgacatggcccaattc
gttcaaacggcacccatgaagaagtcagatatggaagatgaatttgaagatgtcttctta
caaattactaatggagcttggaatagaattgtccgttacttgtttaagaaatatcacgat
cgtttctttatcagtgctgctgcaaaaagcaatcatcacgattttcaaggtggtttagct
tatcacacattgagtatggttcgtttagctgaaaaagttgctgatctttatccacaaatc
aatcgagcactgttaattgccggtgcttgtttacatgattttggtaaaatcgttgaattg
acaggtaatcttgatattgaatatacctttgaaggtaacatgttaggacacattacgatt
gtcgatgaggaaattgttcaagctgcaactgatttacagattaatttagagagtgaagat
atgattcttttacgacacatgattctttcacatcatggtttgttggaatatggctcccca
gaacgccctaaattgcttgaggctgaggttttgcataatatcgtgatggacgcatccatt
aatatgattactaaggcattgactaagactgaaaatggcaagttttcagagcgagtcttt
ggattggataatcgctcattttataagcacagctaa
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