Companilactobacillus alimentarius: LA20249_04970
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Entry
LA20249_04970 CDS
T05458
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
lali
Companilactobacillus alimentarius
Pathway
lali03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lali00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LA20249_04970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lali03400
]
LA20249_04970
DNA repair and recombination proteins [BR:
lali03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LA20249_04970
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LA20249_04970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
RsgA_GTPase
AAA_16
AAA_29
nSTAND3
nSTAND1
AAA_21
AAA_33
AAA_22
AAA_23
AAA_15
APS_kinase
AAA_18
AAA_14
DnaJ_CXXCXGXG
nSTAND6
Viral_helicase1
NACHT
SLFN-g3_helicase
RNA_helicase
cobW
MMR_HSR1
ATPase_2
Mtrc-MtrF_II-IV_dom
Septin
Aq_aa27
T2SSE
Dynamin_N
NB-ARC
dNK
DUF87
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AUI71571
UniProt:
A0A2K9HG98
LinkDB
All DBs
Position
complement(1029585..1032434)
Genome browser
AA seq
949 aa
AA seq
DB search
MLNDKIVIHGARAHNLKDIDVTIPRDKLVVMTGLSGSGKSSLAFDTLYAEGQRRYVESLS
SYARQFLGQMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLWARVGTP
ICPNDGTKITSQSAQQMVDAILKLDEGTKLQVLSPVVRSKRGQHKKALNQIKKQGYVRIR
VDGEIRDVSEDIELDKNKKHSIDVVVDRIVINDHIKSRLFDSVEAALRLSDGYMNVDVIG
SDMMVFSEKNACPICGFTVGELEPRLFSFNAPFGACENCDGLGIKLEVDLDLVIPDQSKT
LAEGAIEPWNPISSQYYPEMLAQACKEFGIDMNVPFEKLPKKDQKTILNGSDGKTFHFHY
ENDFGGVRDVDVPFEGVIPNIDRRYHETNSDFTREVMRKYMTELKCPVCHGKRLNRKALA
VKIAGQDIAEVSDMSIKNELPFFKAVTFGEQNTVIAKPILKEVKDRLAFLINVGLEYLTL
SRSAGTLSGGEAQRIRLATQIGSNLSGVMYILDEPSIGLHQRDNDRLIRSLKKMRDLGNT
LIVVEHDEDTMRAADYLIDVGPGAGENGGRIVAAGTPKEVEDNPKSLTGQYLAGKKFVPV
PLKRRKGNGKAVKVFGAAENNLKKLDVKFPLGKFIVVTGVSGSGKSTLVNMILKRALAQK
MNHNSEKPGKYKKITGYENLEKMIAIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNEAK
LRGYKKGRFSFNIKGGRCENCHGDGIIKIEMNFLPDVYVPCEVCHGTRYNSETLEVTYKG
KNIAQVLDMKVSEALGFFSNIPKIKRKLQTIQDVGLGYVSLGQSATQLSGGEAQRMKLAS
ELYKKSNGKNFYILDEPTTGLHTDDIKRLLGVLQRLVDEGNTVLVIEHNLDVVKSADWLI
DLGPEGGEGGGNIVGIGTPEQIAEIKESYTGQYLKPILERDTKRTKDAQ
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatgataaaattgttattcatggtgcacgtgcacataatttaaaagatattgat
gtgacgattcctcgtgataagttagttgttatgactggtttatcaggttctggtaagagt
tcactggcttttgatacgctttatgctgaaggtcaaagacgttatgttgaaagtttgtca
tcctatgcacggcaatttttaggacagatggataaaccagatgttgattcgattgatggg
ttaagcccagctatttcgattgatcaaaagactacttcgaagaaccctcgttcaacggtc
ggtacggttactgagatcaatgattatttacgtttactctgggctcgtgtagggacgcca
atttgtcctaatgacggaactaagattacgagtcaatcagctcaacagatggttgatgct
attttaaagttggatgaagggactaaattacaagttctttcaccagtcgtaagatcaaaa
cgtggacaacacaaaaaagccttgaatcaaattaagaaacaaggttatgttcgaattaga
gttgacggtgaaattcgtgatgtcagtgaagacattgagctagataagaataagaaacat
agtattgatgtggtggtcgatcgaattgttattaatgatcatattaaatcacgtttgttc
gattcggttgaggctgctttaagattatctgatggctatatgaatgttgatgtgattggc
tcagatatgatggttttctctgaaaaaaatgcttgtccaatttgtggattcactgtaggt
gaactagaaccacgtctattttctttcaacgctccctttggggcctgtgaaaactgtgat
ggtttaggaatcaaactagaagtggatttagatttagttattcctgatcaaagtaagact
ttggctgagggagcaattgaaccttggaatccgattagttcacaatattatccagaaatg
ctggcccaagcatgtaaagaatttggcattgatatgaacgtacctttcgagaaattacct
aaaaaggatcaaaagacaattttaaatggttctgatggcaagacattccattttcactat
gagaatgattttggtggggtccgcgatgttgatgtaccattcgaaggagtaattcctaat
atagatcgtcgttatcatgagacaaatagtgattttacacgtgaggtcatgcgtaaatac
atgactgaattgaaatgtccagtttgtcatggtaaaagattgaatcgaaaagctttagct
gttaagattgcaggtcaagatattgctgaagtttccgatatgtcgatcaaaaatgaattg
ccattttttaaagcggtaacttttggtgaacaaaataccgttattgctaagccaattttg
aaagaagtcaaagatcggctcgctttcttaattaatgttggtttggaatatttaacatta
tcacgatcagctgggactttatctggtggcgaggctcaaagaattcgtctggctacacaa
attggttctaatttatctggggttatgtatattctggatgaaccttcaattgggttgcac
caacgtgataatgatagattgattagatcattgaaaaaaatgcgtgatcttggtaatacg
ttgattgttgttgaacatgatgaagataccatgcgagctgctgattatttgattgatgtc
ggtcctggagctggtgaaaatggtggtcgaatcgtggccgcagggactccaaaagaagtt
gaagacaatcctaagtcattgactggacaatatttagctggaaagaagtttgtaccggta
ccactaaaacgtcgtaagggtaacggaaaagcagttaaggtgtttggtgctgctgaaaat
aatttgaaaaaattagatgtgaaatttcctctaggtaaatttattgttgttactggagtt
tctggatctggtaaatcaactttagttaacatgattttgaaacgtgctttggcacagaaa
atgaatcataattctgagaagccaggtaaatacaaaaagattactggctatgagaacttg
gaaaagatgattgctattgatcagagtccaattggtcggactccgagaagtaatcctgct
acttatacaggtgtttttgacgacattagagatttgtttgctcaaactaatgaggccaag
ttacgaggctataagaagggaagattttctttcaatattaaaggcggtcgctgtgaaaac
tgtcacggagacggaattattaaaattgaaatgaatttcttgccagatgtttatgttcct
tgtgaagtttgtcatggcacacgttataattcagagactctggaagtaacttacaagggt
aagaatattgcccaagttcttgatatgaaggtatctgaagctttaggtttctttagcaat
attcctaagatcaaacgtaagttacagacgattcaggatgttggtttaggttatgtctca
ttgggacaatcagccacacaattatctggtggtgaggctcaaagaatgaagttagcctca
gaactatataagaaatctaatggtaagaatttctatattttagatgaaccaacaacaggc
ttgcatactgacgatatcaaacgtctgctaggcgttttgcaacgtttagttgatgaaggc
aacacggtcttagtgattgaacataacttggatgttgttaagtctgccgattggttgatt
gacctgggtcctgaaggtggcgaaggcggcggaaatattgtcggtattggaactccagaa
cagattgccgaaatcaaggagagctatactggtcaatatttgaagccaattctagaacgt
gataccaaacgaactaaagacgcacaataa
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