Companilactobacillus alimentarius: LA20249_05185
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Entry
LA20249_05185 CDS
T05458
Name
(GenBank) RNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
lali
Companilactobacillus alimentarius
Brite
KEGG Orthology (KO) [BR:
lali00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lali03009
]
LA20249_05185
Enzymes [BR:
lali01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
LA20249_05185
Ribosome biogenesis [BR:
lali03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LA20249_05185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
ARL2_Bind_BART
Motif
Other DBs
NCBI-ProteinID:
AUI72794
UniProt:
A0A2K9HJT0
LinkDB
All DBs
Position
complement(1077093..1077992)
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AA seq
299 aa
AA seq
DB search
MKFVINDNDKRTVRRFLVQHKFSSSQLHNLKNKGGQIFVNHRQRHFNFGLKTGDEVLVVL
SNEKPSDLIEPMRGPVDVIFEDDYLLVINKPPGIASLPAKARDGKTMANLVKAYLIAKNE
NSSIHLVTRLDRDTSGLMVFAKTSYAHSLLDQILHTEDFQKFYLAMIDGQINPKQGLIDL
PIGIDPQAFYRRVIDYKNGKESKTLYKTVAHYPKASLLELKLLTGRTHQIRVHLSAIGYP
IIGDDMYSGKKDQRISRQALHCYNLRIVHPVTKELLNLKAPLPKDMVILKGVLRGERNG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
ctgaaattcgtcatcaatgataatgataaaaggaccgttcgtcgctttttagtgcaacat
aaattttcctctagtcagttgcacaatttaaaaaataaaggtggacagattttcgttaat
catcgccaacgtcattttaattttggattaaaaacaggagacgaagtattggttgtcttg
agcaatgaaaagccatcagacttgattgaaccaatgcgtggacctgttgatgtcattttt
gaggacgattacttattggttataaataaacctccagggattgctagtttacctgctaaa
gcgcgtgatggtaaaacaatggctaacctagtcaaagcctatttgattgctaaaaatgaa
aatagttccattcatttggtaacgcgattagatcgtgatacttctggattgatggttttt
gcaaaaacctcctatgcacattccttattggatcaaatcttacatacggaagattttcag
aagttttatttggcaatgattgatggtcagataaatcctaagcagggattgattgattta
cctattggaattgatcctcaagctttttacagacgtgtgattgattataaaaatggcaaa
gaatcaaaaacactctataaaacagttgcacattatccaaaagctagcttgctggaatta
aagttgctgacgggtcgaacgcatcagataagggtgcatttgtcagcaatcggctatccc
ataattggagatgacatgtatagcggtaaaaaagatcaaagaatctctcgtcaagcttta
cattgttataatttgagaattgttcatcccgttactaaagagttattaaatttaaaggct
cctttacccaaagatatggtaatcttaaagggtgtgctaaggggtgagagaaatggatga
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