Companilactobacillus alimentarius: LA20249_10635
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Entry
LA20249_10635 CDS
T05458
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lali
Companilactobacillus alimentarius
Pathway
lali03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lali00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LA20249_10635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lali03021
]
LA20249_10635
03400 DNA repair and recombination proteins [BR:
lali03400
]
LA20249_10635
Enzymes [BR:
lali01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LA20249_10635
Transcription machinery [BR:
lali03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LA20249_10635
DNA repair and recombination proteins [BR:
lali03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LA20249_10635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF2325
SAM_EPH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AUI72613
UniProt:
A0A2K9HPX9
LinkDB
All DBs
Position
2222385..2223323
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPTITSVEESKDYGKYIIEPLERGYGTTLGNSLRRVLLASLPGTAVSDIQIDGVL
HEFSAIDGVIEDVTQIVLNVKKLKLKSYADDSLKAEIDVVGPATVTAKDIKADDDLEILD
PEQFICTVAEGGHFHMQMTVINGRGYTPAEQNKTDETPIGVLPVDSIFTPVEKVNYQVEN
TRVGKRNDFDKLTIDIWTNGSIGPREAISLSAKILTEHLTSFVNLTEEAKSADMMIEKEE
TQKEKKLEMTIEELDLSVRSYNCLKRAGINTVQELTEKSEADMMRVRNLGRKSLVEVKEK
LADLGLSLKQED
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaatttgaaaagccaaccattacttctgttgaagaaagtaaagattatggcaag
tatattatcgaaccgcttgaaagaggttatggtacaactttaggtaattcattacgtaga
gttttgttagcatcattaccaggaactgcggtatctgatattcaaatagatggtgtattg
catgaattttcagctattgatggcgtaattgaagacgttacacaaatcgtgttaaacgtt
aagaaattaaagctcaagtcttatgctgatgacagtttaaaagctgagatcgacgtcgtt
ggtcctgctactgttacagctaaagatatcaaagctgatgatgacttggaaatcctcgat
ccagaacaatttatttgtactgttgctgagggtggacacttccacatgcaaatgacagtt
attaatggtcgtggatatactcctgcagaacaaaataaaacggacgaaacacctattggt
gttcttccagttgactcaatttttacacccgtagaaaaagttaactatcaagttgaaaac
actcgtgtgggtaagagaaacgacttcgacaaattaacaatcgatatctggacaaatggt
tcaattggaccacgcgaagctattagtttgtcagcaaagattcttacagaacatttaaca
agttttgtaaatcttactgaagaagctaagagtgctgatatgatgatcgaaaaagaggaa
actcaaaaagagaagaaacttgaaatgactattgaggaacttgacttgtcagttcgttca
tataattgtttgaagcgtgccggtattaatactgtgcaagagcttactgaaaaatctgaa
gcagatatgatgcgtgtaagaaatcttggacgcaaatcacttgttgaggttaaagaaaag
cttgctgaccttggattgtcattaaagcaagaagactaa
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