Leucobacter allii: MUN78_03625
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Entry
MUN78_03625 CDS
T09032
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lall
Leucobacter allii
Pathway
lall03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lall00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MUN78_03625 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lall03021
]
MUN78_03625 (rpoC)
03400 DNA repair and recombination proteins [BR:
lall03400
]
MUN78_03625 (rpoC)
Enzymes [BR:
lall01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MUN78_03625 (rpoC)
Transcription machinery [BR:
lall03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MUN78_03625 (rpoC)
DNA repair and recombination proteins [BR:
lall03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MUN78_03625 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
UOQ57941
LinkDB
All DBs
Position
810336..814229
Genome browser
AA seq
1297 aa
AA seq
DB search
MLEGTSFNELQIRLATAEDIRSWSFGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
ACGKYKRVRYKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMIIDIDEEGRHEDLAELEAELRLELKALEDQRDISIAQRQQQAESD
LAALEAEGAKADQRRRAEASAEKEMAAIRKGFDDDIARLQRVWEDFRNLKVGDLKPEDAV
FADLMDRYGDYFEAYMGAEAIKKRLESFDLAAESDTLHLQIAEGKGQKKIRAIKRLKVVN
SFLQTGASPAAMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVIKRLMDLSHAQNVKAAKRMVERAR
SEVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARVLMLASNNILKPSDGRPVTLPSQDMIVGLHYLTTVKQDTVGTGR
AFGSIAEAILAKDEGTLDIASQVKIRLVGYTDANGVTYDKPKLVETSLGRAIFNEALPVD
YPYFERVADKGALSGLVNDLAERYPKTEVAATLDRIKDAGFKWASQSGITVALSDIVTPA
NKYDIIAEHEQRAAKVQRDFDRGLILDSDRHKALTEIWTEATDEVAAAMRESFPEDNTIF
RMVSSGARGNWLQIRNIAGMRGLVSNPKGEIIPRPIINSYREGLSVAEYFIATHGARKGL
ADTALRTADSGYLTRRLVDVSQDVIIREEDCGTRRGLDLPIAEADANGVLVRDENVENSV
YARTLAADAVNGEGTVVAAAGEDVGDVLIDKLVAGGVTEIKVRSVLTCESAVGVCATCYG
RSLATGQRVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVQELFEAR
TPKGASPIAEAAGRVTIEDTEKSRRILLTPDDGTEEKAYPVLKRATLLVEDGDHVELGQP
FLQGTLDPKDILQVGSTENGKHIPGERAVQKYLVEGVQGVYRSQGVPIHDKHIEVIVRQM
LRKVTVVDHGETELLPGELVDRSRYQRINREALLETKRAATARPEVMGITKASLATESWL
SAASFQETTRVLTQAAMEGSRDPLIGLKENVIIGKLIPAGTGLSGYRDVDVAATEEAKAE
RYPNRLFATEGTFDENDLSFVDFDSFTADEFNPGNYS
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgagggtacgagtttcaacgagctgcagatccgtctggccaccgccgaggacatc
cgcagctggtcgttcggcgaggtcaagaagccggagaccatcaactaccgcacgctgaag
ccggagaaggacggcctcttcggcgagcagatcttcggtcccagccgcgactgggagtgc
gcctgcggcaagtacaagcgggtccgctacaagggcatcgtctgcgagcgctgcggcgtc
gaggtgacgaagtccagcgtgcgacgcgagcggatgggccacatcgagctcgccgcgccc
gtcacgcacatctggtacttcaagggcgtcccgtcgcgcctgggctacctgctcgacatg
gcgccgaaggacctcgagaaggtcatctacttcgccgcgtacatgatcatcgacatcgat
gaggaggggcgtcacgaggatctcgcggagctggaggccgagctgcggctcgagctgaag
gcgctcgaggatcagcgcgacatctcgatcgcgcagcgccagcagcaggccgagtccgac
ctcgcggcgctcgaggccgagggggcgaaggcggatcagcgccgtcgcgccgaggcctcc
gccgagaaggagatggccgcgatccgcaagggcttcgacgacgacatcgcgcgcctgcag
cgggtgtgggaggacttccgcaacctgaaggtcggcgacctcaagcccgaggacgcggtc
ttcgcggacctcatggaccgctacggcgactacttcgaggcgtacatgggcgccgaggcg
atcaagaagcgcctcgagtccttcgacctcgccgccgagagcgacacgctgcacctgcag
atcgccgagggcaagggccagaagaagatccgcgccatcaagcgcctgaaggtcgtgaac
tccttcctgcagacgggcgcgagcccggccgcgatggtgctcgacgtggtgccggtgatc
cctccggagctgcgcccgatggtccagctggacggcggccgcttcgcgacctcggacctc
aacgacctctaccgtcgcgtgatcaaccgcaacaaccgcctgcggcgcctgctcgatctc
ggcgcccccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggccgcccggtgacgggcacgggcaaccgcgccctgaag
tccctgagcgacatgctcaagggcaagcagggccgcttccgccagaacctgctcggcaag
cgcgtcgactactccggccgttcggtcatcgtcgtcggcccgcagctgaagctgcaccag
tgcggcctgcccaagcagatggcgctcgagctgttcaagccgttcgtcatcaagcgcctc
atggacctgtcgcacgcgcagaacgtgaaggccgccaagcgcatggtggagcgcgcgcgc
tccgaggtgtgggacgtgctcgaggagatcatccgcgagcgcccggtgctgctcaaccgc
gcgccgaccctgcaccgcctcggcatccaggccttcgagccccagctcgtcgagggcaag
gcgatccagctgcacccgctcgtgtgcgccgcgttcaacgcggacttcgacggcgaccag
atggccgtccacctgccgctctcggtcgaggcgcaggcggaggcgcgcgtgctcatgctc
gcgtcgaacaacatcctgaagccctccgacggccgcccggtgaccctgccctcgcaggac
atgatcgtcggcctgcactacctcaccactgtcaagcaggacacggtcggcaccggccgc
gccttcggctcgatcgccgaggcgatcctcgcgaaggacgagggcaccctcgacatcgcg
tcccaggtcaagatccgcctcgtcggctacaccgatgcgaacggcgtgacctacgacaag
ccgaagctcgtggagacctccctcggccgcgccatcttcaacgaggcgctgccggtggac
tacccgtacttcgagcgggttgccgacaagggcgcgctctcgggcctcgtcaacgacctc
gccgagcggtacccgaagaccgaggtcgccgcgaccctcgaccggatcaaggacgcgggc
ttcaagtgggcctcgcagtcgggcatcaccgtggcgctctcggacatcgtgacgccggcg
aacaagtacgacatcatcgcggagcacgagcagcgcgccgcgaaggtccagcgcgacttc
gaccgcggcctgatcctcgacagcgaccgccacaaggcgctgacggagatctggaccgag
gccaccgacgaggtcgccgccgccatgcgcgagtcgttccccgaggacaacaccatcttc
cggatggtgtcctcgggcgcccgaggcaactggctgcagatccgcaacatcgccggcatg
cgcggcctggtgtcgaacccgaagggcgagatcatcccgcgcccgatcatcaactcgtac
cgcgagggcctgtcggtggcggagtacttcatcgcgacccacggcgcccgcaagggcctc
gcggacacggcgctccgcaccgcggactccggctacctgacccgtcgactcgtcgacgtc
tcccaggacgtcatcatccgcgaggaggactgcgggacccgccgcggcctcgacctcccg
atcgcagaggcggacgcgaacggcgtgctggtgcgcgacgagaacgtcgagaactcggtg
tacgcccggacgctcgcggccgacgcggtcaacggcgagggcaccgtcgtcgcggcggcg
ggcgaggacgtgggcgacgtgctcatcgacaagctcgtggcgggcggcgtgaccgagatc
aaggtccgctccgtgctcacctgcgagtccgcggtcggcgtctgcgcgacctgctacggc
cgttcgctcgcgaccggtcagcgcgtcgacatcggcgaggccgtcggcatcatcgcggcc
cagtcgatcggcgagccgggcacccagctcacgatgcgcaccttccacacgggcggttcc
gcgtcggccgacgacatcacgcagggtctgccccgcgtgcaggagctcttcgaggcgcgc
accccgaagggcgcctccccgatcgccgaggccgccggccgcgtcacgatcgaggacacc
gagaagagccgccgcatcctcctcacgccggacgacggcaccgaggagaaggcctacccc
gtgctcaagcgcgcgaccctcctcgtcgaggacggcgaccacgtcgagctcggccagccc
ttcctccagggcacgctcgacccgaaggacatcctgcaggtcggctccacggagaacggc
aagcacatccccggcgagcgcgcggtgcagaagtacctcgtcgagggcgtgcagggcgtc
taccgctcgcagggcgtgccgatccacgacaagcacatcgaggtcatcgtgcgccagatg
ctgcgcaaggtgacggtcgtcgaccacggcgagaccgagctgctcccgggcgagctcgtg
gaccgctcgcgctaccagcgaatcaaccgcgaggcgctgctcgagaccaagcgcgccgcg
acggcgcgccccgaggtcatgggcatcaccaaggcctcgctcgcgaccgagtcgtggctg
tcggcggcctccttccaggagaccacgcgcgtgctcacccaggcggcgatggagggatcg
cgggatccgctcatcggtctcaaggagaacgtcatcatcggcaagctcatccctgcgggc
accggcctgtcgggctaccgcgacgtcgacgtggcggcgaccgaggaggcgaaggcggag
cggtacccgaaccgcctgttcgcgaccgagggcaccttcgacgagaacgacctctccttc
gtggacttcgacagcttcacggccgacgagttcaacccgggcaactacagctga
DBGET
integrated database retrieval system
