Leucobacter allii: MUN78_09110
Help
Entry
MUN78_09110 CDS
T09032
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
lall
Leucobacter allii
Brite
KEGG Orthology (KO) [BR:
lall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lall03019
]
MUN78_09110 (hrpA)
Enzymes [BR:
lall01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MUN78_09110 (hrpA)
Messenger RNA biogenesis [BR:
lall03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MUN78_09110 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
AAA_30
PhoH
NACHT
T2SSE
nSTAND3
AAA_23
FtsK_SpoIIIE
HA2_N
SLFN-g3_helicase
ResIII
TsaE
Ploopntkinase3
Zeta_toxin
SRP54
Motif
Other DBs
NCBI-ProteinID:
UOQ55867
LinkDB
All DBs
Position
1949268..1953233
Genome browser
AA seq
1321 aa
AA seq
DB search
MTNPLPHIDFPGDLPVSQMREEIAAAIRDHQVVIVAGETGSGKTTQLPKIALALGRERIA
HTQPRRIAARTIAERVAEELGSELGGLVGYQVRFTDQVSAETRIRLMTDGILLNAIHRDR
ELAAYDTIIIDEAHERSLNIDFLLGYLKTLLPRRPDLKVIITSATIDPESFARHFADART
GESAPVIEVSGRTFPVELRYRPLVDEIRSPDPKGGPDRIRKVERDLFDAIGDAVDELGRE
APGDVLVFLSGEAEIRDASDALRGRLGRNAARPVEILPLYGRLSAAEQHRVFERPKGGGV
RRIVLATNVAETSLTVPGIRYVVDAGTARISRYSARSKVQRLPIEAVSQASANQRSGRSG
RTSPGIAIRLYSEEDFAARPEFTEPEVRRTGLASVILQMLALGLGEIAKFPFLTPPDPRG
IADGMGLLVELGAVRAEGRGSRAQHRITRIGRELSRLPIEPRFARMVVEARRHEVVPEVL
AIVAGLTVQDVRERPQAERGRADELHARFADPQGDLMTLLNLWNHLQERQRELSSSAFRR
LCKAEYLNFLRVREWMDLYRQLSRIAKAPRGEARGAGPGSDSGAGPVSESGSGAGPGEAI
HRSILAGLLSQLGVRDDRQDRSAPARGRSTAGAVKRRPAQEYLGSRGTRFVLYPGSVLAK
KPPEVVMSVELVETSRLFARSNAVVDPAWAEELAGPLAKRQLSEPRWEKRQGAAVATERV
TLYGVAIVDGRRVQLSRFDPEHARELFIRHALVEGDWDSPQAFDRANRQLRRELEQLEER
TRRRDIVGDDEAVFEFYDARIPADVVSTRSFEGWWKRKRETDPQFLHLRREDLLEEEAEE
VDESEFPKQWRHGDQTLRLRYRFDPTAEDDGVTVNVPLPLLPRLDGSAFEKLVPGLRHEL
VTALIKTLPKAIRKHVVPAADWARTLLEAVAPRLDAAPAAGGGDGGPALTQLLADEIRRR
TSVPVAADDFDPTRLPAHLTPTFRVVDGRGRTVGTGKDLGALQAAHQERATEGVAKVAAA
AMPTSELERKGATAWEFGELPRHVDTAYAKGRGSGAGVVRAYPALLDRRTSVDLVLVADE
AEQARLSRRGILRLVALSSPSPASYVREHLSNQEKLLLSAGPYRTPDLAIADVSLAVAER
VIRRHAADGLVWSEAVFQAIADDYARSLIDEIYAAIALTARTLDAARLARKAIDGAKSLQ
VLGQIADAARQVDGLVFDRFVSRTGLARLERLPVYLEAVRLRMEHLPAQPGRDRAWQNEV
DRALALLAEAGGEIPLAPEAPAHLVRARWLVEELRVSLFAQQLRTAEPVSLQRIQKALRE
G
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatccgctcccgcacatcgactttcccggcgacctccccgtctcgcagatgcgc
gaggagatcgctgcggcgatccgcgaccatcaggtggtgatcgtcgccggcgagaccggt
tcgggcaagaccacgcagctgccgaagatcgccctcgccctcggacgcgagcgcatcgcg
cacacgcagccgcgccgcatcgcggcgcgcacgatcgcggagcgcgtcgccgaggagctc
ggcagcgagctcggcggcctcgtcggctaccaggtgcgcttcacggaccaggtgtcggcg
gagacccggatccggctcatgaccgacgggatcctgctgaacgcgatccaccgcgaccgc
gagctcgccgcctacgacaccatcatcatcgacgaggcgcacgagcgcagcctgaacatc
gacttcctgctcggctacctcaagacactgctcccccgtcggcccgacctgaaggtcatc
atcacctccgcgacgatcgaccccgagtccttcgcgcggcacttcgccgacgcccgcacc
ggcgaatcggcgcccgtcatcgaggtctcgggccgcacctttcccgtggaactgcgctac
cgccccctcgtcgacgagatccgctcccccgacccgaagggcggacccgaccggattcgg
aaggtggagcgcgacctcttcgacgcgatcggggacgccgtcgacgagctcgggcgcgag
gctccgggcgacgtgctcgtcttcctctccggcgaggcggagatccgggacgcgtccgac
gcgctgcggggccgtctcggccgcaacgcggcgcggcccgtcgagatcctgcccctgtac
ggccggctgagcgccgccgagcagcaccgcgtattcgagcgcccgaagggcggcggtgtg
cggcgcatcgtgctcgcgacgaacgtggcggagacctcgctcacggtgccgggcatccgc
tacgtcgtcgacgccggcaccgcgcgcatctcgcgctactcggcccgcagcaaggtgcag
cggctgcccatcgaggcggtgtcgcaggcgagcgccaaccagcgctccggacgctccggg
cgcacgagcccgggcatcgcgatccggctgtacagcgaggaggacttcgccgcgcggccg
gagttcacggagccggaggtgcggcgcacggggctcgcctccgtgatcctgcagatgctc
gcgctcggcctcggggagatcgcgaagttccccttcctcaccccgcccgacccccgcggc
atcgccgacggcatggggctcctcgtggagctcggcgcggtgcgggcggagggccgggga
tcccgcgcgcagcaccgcatcacccggatcggacgggagctctcccgcctgcccatcgaa
ccgcgcttcgcgcggatggtcgtcgaggcccgccggcacgaggtcgtgcccgaggtgctc
gccatcgtcgcgggactcaccgtgcaggacgtgcgcgagcggccgcaggccgagcggggg
cgagcggacgagctgcacgcgcgcttcgccgatccgcagggcgacctcatgacgctgctg
aatctgtggaaccatctccaggagcggcagcgcgagctctcctcgagcgccttccggcgg
ctgtgcaaggccgagtacctgaacttcctccgggtgcgcgagtggatggatctgtaccgc
cagctctcccgcatcgcgaaggcgccgcggggcgaggcccgcggcgcgggaccgggctcg
gattcgggcgcgggtccggtctcggaatcgggctcgggcgcaggaccgggcgaggcgatc
caccgctcgatcctcgcggggctgctctcgcagctcggcgtgcgcgacgaccggcaggac
cggagcgccccggcgcgcgggcgctcgaccgccggggcggtgaagcgccgtccggcgcag
gagtacctcggatcccgcggcacccgcttcgtgctctacccgggctcggtactcgccaag
aagccccccgaggtcgtgatgagcgtcgagctcgtcgagacctcgcgcctcttcgcccgc
tcgaacgccgtggtcgatccggcgtgggcggaggagctcgcgggcccccttgcgaagcgc
cagctctccgagccccgctgggagaagcggcagggcgcggccgtcgccacggagcgcgtg
acgctctacggggtggcgatcgtggacggccgccgggtgcagctctcccgcttcgacccg
gagcacgcgcgggaactgttcatccgccacgccctcgtggagggcgactgggattcgccg
caggccttcgaccgcgcgaaccggcagctgcgccgcgagctcgagcagctcgaggagcgc
acgcgacgccgcgacatcgtcggcgacgacgaggccgtcttcgagttctacgacgcgcgg
atcccagccgacgtcgtctccacgcggagcttcgagggctggtggaagcgcaagcgggag
accgacccgcagttcctgcacctccgtcgcgaggacctgctcgaggaggaggccgaggag
gtcgacgagtcggagttcccgaagcagtggcggcacggcgaccagacgctgcggctgcgc
taccgcttcgacccgacggcggaggacgacggggtgacggtgaacgtgccgctgccgctg
ctgccccggctcgacggctcggccttcgagaagctcgtgcccgggctccgccatgagctc
gtcacggcactcatcaagacgctgccgaaggcgatccggaagcacgtcgtccccgcggcc
gactgggcgcgcacgctcctcgaggcggtcgcgccgcggctcgacgcggcccccgccgcg
ggcggcggcgacggcggccccgcgctcacgcagctgctcgcggacgagatccgccggcgc
acgagcgtgcccgtggccgccgacgacttcgatccgacgcgattgcccgcgcacctcacc
cccacgttccgcgtcgtggacggccgcggtcgcacggtcggcacgggcaaggacctcggc
gcgctgcaggccgcgcaccaggagcgcgcgaccgagggcgtggcgaaggtggccgccgcg
gcgatgccgacgagcgagctcgagcggaagggcgccacggcctgggagttcggggagctg
ccgcggcacgtcgacaccgcctacgcgaaggggcgcggctcgggcgccggcgtggtgcgc
gcgtaccctgcgctcctcgaccgccgcacgagcgtcgatctcgtgctcgtggccgacgag
gcggagcaggcgcggctatcccgccgcgggatcctgcgcctcgtcgcgctgagctcgccc
tcccccgcgagctacgtgcgcgagcacctctcgaatcaggagaagctgctgctctcggcc
ggcccgtaccggacgccggacctcgcgatcgccgacgtctcgctcgcggtcgccgaacgg
gtcatccggcggcacgccgccgacgggctcgtgtggtcggaggcggtcttccaggcgatc
gcggacgactacgcgcgcagcctcatcgacgagatctacgccgcgatcgcgctgacggcg
cgcacgctcgacgccgcgaggctcgcgcgcaaggcgatcgacggggcgaagtcgctgcag
gtgctcgggcagatcgccgacgcggcgcggcaggtggacggtctcgtcttcgaccgcttc
gtgtctcgcacggggctcgcacgactggagcgcctgcccgtctacctcgaggcggtgcgg
ctgcggatggagcatctgcccgcgcagcccggtcgcgaccgggcctggcagaacgaggtg
gatcgcgcgctcgccctcctcgccgaagccggcggcgagatcccgctcgcccccgaggcg
cccgcgcatctcgtacgggcgcgatggctcgtcgaggagctgcgggtgagcctcttcgcg
cagcagctgcgcactgcggagccggtgtcgctgcagcgcatccagaaggccctccgcgag
gggtag
DBGET
integrated database retrieval system
