Limosilactobacillus allomucosae: ABC765_00160
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Entry
ABC765_00160 CDS
T10728
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lalo Limosilactobacillus allomucosae
Brite
KEGG Orthology (KO) [BR:
lalo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lalo03400
]
ABC765_00160
Enzymes [BR:
lalo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABC765_00160
DNA repair and recombination proteins [BR:
lalo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ABC765_00160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
DUF1583_N
HDNR
Motif
Other DBs
NCBI-ProteinID:
XBG95586
UniProt:
A0AAU7C368
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All DBs
Position
36343..40056
Genome browser
AA seq
1237 aa
AA seq
DB search
MSSLKFILGTAAYDHQAGLLAELKQQLAADPKGEFFYLVPNHIKFATEIEVLNRLKNTAE
QDPDQPYAQMKVQVLSFSRLAWYLLRDTPAFQAPRLSPTGLTMLTAQIVNQHQNEMQMFA
GEIKRPGFIKELTQQLTELQTARIAPTDYAAIMERAQTWAKDNHQILDDVWQAKLKVIFL
VYGEFVKALGDYQDISQIDALLVKYLQQKDLSHAYFYLDRFSQFTARELQIVQALIKNAQ
ATTIALVLDRPYQNQLPDEHNLFYESGRQYYRLSKFAKQTPGVKQLADVMADQPRVTADL
QVLDRVLAAQAQMLNELPSAPLQDSQSIQFFTAPNRVAELNLIAAKIRQLVSTGKYRYRD
FLILTRHLDGYATMLESVFKAHEVPIFNDLERLMNNHPLVNLIEALFKVYQRHFATSDVM
HLLKTGLLIPQKMHDDLGRPVTRKYFQKAVYQTENWCLQYGRTGDDWLSSQQWHFDPNVD
AEELRHHPDMQKRDQYASAPLNVVKDYVSGLQKFFSQLDQAENGAAAAKALYGFLVNAGV
VKRLEEWSLADSRSDLARAQEPQQVWQVFCNLLDEYVQILGQQQPFLIDEFADLLMAGFE
AAQYSQIPSTLDQVVISETGIVQTTTRKVVFMMGATSDVMPEAKSATGLLSDPDRELLNA
CLDDEQFLPASGVEKMSNEPFLNYLGFMSGRQRLIISAPQIGNDEKPLGMSPYMIDLAMA
FDCWDADKKRLKDDLPFMAQPQDTATAAWPFVSAPFAVLGTLMQVKRQALDDHQPLGAAW
NFLSELMAQKVKRYDWTAQSLDYTNETMPLPADLAERLYGQWDPEALDARTQALQNGERP
GEIAPALQHDTLYASISQLQDYYRNPYEYFLKYGLRIQKREELEISADKSGTFFHDSLDR
FMRLLSEQGLTLSQLTDDQLQRLTHQAMAWAFDQQPQLIQLTQNYQRLAFRKRQLERLVE
TMTKVLRDQSKLTRAKNVVTEQKFGVMDLSDQGQQSFAPLIYPLDHGHKVYLRGRIDRID
SVELNQEPYLMVVDYKSGNQQFNLVEAYDGLALQMLSYLNSLSHQLKLNQQSAKIAGALY
LHLQNPVFKWEDLSGSLASEELKSHRYRGVLLNDRQLLNDLDQGFDNFKPQILSLRAFKN
GNIKANSGMALVDESQLAALLQRNQERIVNAATQIFAGDTSLRPYRLDKRDGLQYSDYQD
IYRFDPMLDQKNYRDILLTERDVQEKLKQESQGEKHE
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcttaaagtttattttagggacagccgcgtatgatcatcaggctggtctgctg
gctgagctgaaacagcagctggccgctgatcctaaaggcgagttcttctacctggttccc
aaccatattaagtttgcaaccgaaatcgaagtgctgaatcggctgaaaaataccgctgag
caggatccggatcagccatatgctcagatgaaggtacaggtactgtcgttcagtcggctg
gcgtggtacctgctgcgcgacacaccggcttttcaggcgccacggctttcgccaaccggg
ctgacgatgctgacggctcaaatcgtcaaccagcatcaaaatgaaatgcagatgtttgcc
ggcgaaatcaagcggccaggttttatcaaggaactgacgcagcagctgactgaactgcag
acggctcggatcgcaccgactgactatgcggctatcatggaacgtgcacagacctgggcc
aaagacaatcatcagatcttagatgacgtctggcaggctaagcttaaagtcatatttctg
gtttacggcgaattcgtgaaggcactgggcgactatcaagatatcagtcagattgacgcg
cttttggtgaagtatctgcagcaaaaggatctgtcgcatgcctatttttatctggatcgg
ttttcgcagtttacggctcgtgagctgcagatcgtacaagcgctgatcaaaaatgctcag
gcgaccacgattgcactggttttagatcgtccataccaaaatcagctgccagatgagcat
aatctgttttatgaatcgggacgtcagtactaccgcttgtcaaaattcgccaagcaaacg
ccgggcgtcaagcagctggcagacgtgatggccgaccagccgcgcgttactgcagatctg
caggtgctggatcgggtcttggcggctcaggctcagatgctgaatgagctgccgagcgcg
ccgcttcaagattcccaaagcattcagttctttacggcccctaatcgcgtggcagagctg
aatctgattgcagccaagattcgtcagctggtcagcacgggtaaataccgctaccgggac
tttttgattttgacgcgccatctggacggctatgccacgatgcttgagtcggtttttaaa
gcgcatgaggtgccgatttttaatgaccttgagcgcctgatgaacaatcatcccctggta
aatctgattgaggcgctgtttaaggtttatcagcgtcattttgcaaccagtgacgtgatg
caccttttgaagactggattgctgattccgcaaaaaatgcatgatgatctgggccggcct
gttacgcgaaaatattttcaaaaggccgtctaccaaacggaaaactggtgtctccagtat
ggccgcacgggtgatgattggctgagcagtcagcagtggcattttgatcccaacgtcgat
gccgaagagctgcggcaccatccggatatgcagaaacgcgatcagtatgcctcggcacca
ttaaacgtcgtcaaggattacgtcagcggactgcaaaaatttttcagccagcttgatcag
gcagaaaacggcgcggcggcagccaaggcactgtacggctttttggtcaatgccggcgtt
gtcaagcggctggaggaatggtcgcttgccgacagccggtctgatctggcaagagcgcag
gaacctcagcaggtctggcaggtcttttgcaatctgttggacgagtacgtgcagatttta
ggtcagcagcagccatttttaatcgatgagtttgctgatttattgatggccggttttgag
gccgcgcaatactcgcagattccatcaaccttggatcaggtcgtgatttcagaaaccggg
atcgtgcaaaccaccacgcgcaaagtcgtctttatgatgggcgcaaccagcgacgtcatg
ccggaagccaagtcagccacgggtctgcttagtgatccggaccgcgagctgctgaatgcc
tgtctggatgacgaacagtttctgccagccagcggggttgaaaaaatgagcaacgagccg
tttttaaactacctgggctttatgagcggccgccagcgtttgatcatttcggcaccgcag
atcggcaatgatgaaaaaccgcttggcatgtcgccttatatgattgatctggcgatggcg
tttgattgctgggatgccgataagaaacgtctcaaagatgatctgccgtttatggcccag
ccccaggataccgcgacagctgcctggccgtttgtcagcgcgccatttgccgtattgggc
acgctgatgcaggttaagcggcaggcattggatgatcatcagccattgggcgcggcctgg
aactttttaagcgagctgatggcgcaaaaggtcaagcgctacgactggacggcgcaaagt
cttgactataccaacgaaacgatgccgctgccggctgatctggcagaacgactgtatggt
caatgggatccagaagcactggatgcacgaacacaggcactgcagaacggtgaacggcca
ggcgaaatagcacccgcgctgcagcatgacacgctgtatgcctcaatttctcaattgcag
gactattatcgcaacccatatgaatactttcttaaatatggtctgcgcattcaaaaacga
gaagagctggaaatctcggctgataaatctgggacgtttttccatgacagtctggatcgc
ttcatgcggctgcttagtgagcagggcttaacactcagccaattgaccgatgatcagctg
cagcgtctcacccatcaggcaatggcttgggcctttgatcagcagccgcagttgattcaa
ttaacacagaactatcagcgattggcctttcgcaagcgacagctggaacgtctggtcgaa
acgatgacgaaggttttgcgtgatcaatccaagctgacgcgcgccaaaaacgtggtaacg
gaacagaaattcggcgtgatggacttgagcgatcaagggcagcagagctttgcgcctttg
atctatccgcttgatcatggtcacaaggtctatctgcgtggccggatcgaccggattgat
tccgttgagctgaatcaggagccttatttgatggtggttgactataaatccggcaatcag
cagtttaatctggtcgaggcctatgatggcttggcactgcagatgctgtcatatctaaac
agcctcagccaccagctcaagctgaatcagcagtcggccaagatcgccggggctttgtac
ctgcacctgcagaatcccgtctttaaatgggaggatctcagcggcagtctggcatctgaa
gaattaaagagtcatcgctatcgaggggtcctgctgaacgatcggcaattgctgaatgat
ctggatcagggctttgacaatttcaaaccgcagattctgagcctgcgcgcctttaagaac
ggcaacatcaaggccaacagcggcatggcactggttgatgaatcacagctggccgctctt
ttacagcgtaatcaggaacgcatcgtcaacgcggcgacgcagatttttgcgggggacacg
tctttgcgcccatatcggcttgataagcgcgacggcctgcaatacagcgactatcaagac
atctaccgctttgacccaatgctggatcaaaagaactatcgcgacattctgctaaccgag
cgcgacgtacaggaaaagctgaaacaagaatcacagggggaaaaacatgagtga
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