Limosilactobacillus allomucosae: ABC765_04365
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Entry
ABC765_04365 CDS
T10728
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lalo Limosilactobacillus allomucosae
Pathway
lalo03030
DNA replication
lalo03430
Mismatch repair
lalo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lalo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABC765_04365
03430 Mismatch repair
ABC765_04365
03440 Homologous recombination
ABC765_04365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lalo03032
]
ABC765_04365
03400 DNA repair and recombination proteins [BR:
lalo03400
]
ABC765_04365
Enzymes [BR:
lalo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABC765_04365
DNA replication proteins [BR:
lalo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABC765_04365
DNA repair and recombination proteins [BR:
lalo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABC765_04365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
HROB
TTC5_OB
Motif
Other DBs
NCBI-ProteinID:
XBG96325
UniProt:
A0AAU7C5S8
LinkDB
All DBs
Position
906234..909560
Genome browser
AA seq
1108 aa
AA seq
DB search
MEIVPLNVISTYSLLQSPLRPTELVQGAKSRGYRAVALADWNVMYGAIDFYNAAKAAGIK
PLLGLRLHLKTMAMTTQGLEVLFLARTQAGYVNLMQLSTLKQTRAQGRFLTQQEIEPFLT
DLDLILPAQPLTLDQTMIDQWLPALIEKTTRHCWLGVDLELDAIQREQIRQTARHYAVSL
VAAPKIEYLENDDAFATDVLRHIDEGAKMTNPFFQAQNTISHALPTKERLQQAFLDSEFE
DAAAQTAIIAQECNVEIKFQTPILPKFPTPNQQSAADYLKQLCLAGLKKRPLAAGYSPTD
YEKRLQRELTTIHEMGFDDYFLIVWDVMRFAHQKKMATDPGRGSAAGSLVAYVLEITEVD
PLKYQLLFERFLNPERAQMPDIDLDLPDNRRDEVLQYVHQKYGHARVAQIITFGTFGAKQ
AVRDVGRVFGMPVYAIDELARAIPNLPKITLQQALNESRALNNLLSDSAQNALLMKTALR
IEGLPRHYSTHAAGVVLSQAPLNQLVPLQNGSDGLLMTQFPKDTVEALGLLKMDFLGLRN
LSIMDSALRLIEKSQPDFDLHQISLNDPLTLKLFQKGATEGIFQFESSGIRQVLIRLHPE
NFEMIVAVNALYRPGPMDNIAHFIARKEGREKVTLPDPSLASILAPTYGILVYQEQVMQL
AAKMAGFTLGQADLLRRAMSKKKADVMERMRGRFINGAVANGYSRPVAEQVFEYIDRFAN
YGFNRSHAVAYSMMAFEMAYLKCHFAPAFFAALLNAHAGSEKMRTYFEDAKSFGVVIAGP
SINFSQADFSLYQGRVLFGLSMIKGVRRDLISEILLKRKDGQFASLADFIGRIDVRFRKP
ELIAPLIYAGAFDHLGSNRAEMIDALADLIEGAEFNQALSGSDTFQTMIPARSEYPLAQR
LEKEHEYLGVYLSGHPVSQYRSLAGQLHAVTVAQLREGMNATLILYVSRVKTINTKKTRQ
PMAFVSASDETGSIEVTVFPKQFQRYQELIAARNVLIISGRVENRNGSLQLLASRIQLAS
SAGERGSAPAETRWFLQLKKSVLTPRLTAQLQEFIGSHHGNVPVMVYYPEKRQTRLLPRS
QWLSGDEATKKGLIDLLGVSNVVYQSTP
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgtgccgctcaacgtgatcagtacctacagtctcctgcagagtccgctgcgc
ccgactgaattggttcaaggagccaaaagcaggggctatcgggcggttgccttggctgac
tggaacgtgatgtatggggcaattgatttttataatgctgccaaagccgcgggcattaag
cctttgctggggttgcggctgcatttgaaaaccatggcaatgaccacgcagggcttggaa
gttttgtttttggcccgtacgcaggctggctacgttaacctgatgcagctgtcgacttta
aagcagacgcgggcacagggacggtttttgacgcagcaggagatcgagccgtttttaacg
gacctggatctgattttgcctgctcagccgctgacgcttgatcaaacgatgatcgaccaa
tggctgccggcgctgattgaaaagacaacgcggcattgctggctgggggttgatctggag
cttgatgccatccagcgcgaacagatcagacagacggcgcgacactatgccgtttcactg
gtagcagcccctaaaatcgagtatctggaaaatgatgatgcctttgcgaccgatgtttta
agacatattgatgagggggccaaaatgaccaacccgtttttccaggcccagaatacgatc
agtcacgccctgccaaccaaagaacggctgcagcaggcctttttggattctgaatttgaa
gatgcggctgctcagacagcgatcatcgcgcaggaatgcaatgttgagatcaagtttcaa
acgcctatcctgcctaagtttccgacgccaaaccagcaaagcgcggccgattatctaaag
cagctctgtttggcaggactgaaaaagcgtccattggcagctggctattcgccaactgat
tatgagaagcgtctgcagcgtgaactgaccacgattcatgaaatgggctttgatgattat
tttctgattgtctgggacgtcatgcgctttgctcaccaaaaaaagatggcgactgatcca
gggcgtgggtcggcagctggttcgctagtggcctacgtgctggagattactgaagtcgat
cccctgaaataccagctgcttttcgaaaggttcttaaatccagaacgagctcagatgccg
gatatcgacttggacctgccagataatcggcgtgatgaggttttgcaatacgttcatcaa
aagtatggtcatgccagagttgctcagatcattacctttgggacgtttggtgctaagcag
gccgtcagagacgtgggccgggtttttggcatgccggtctatgccatcgacgaactggcc
agagcgattcccaacctgcctaagattacgctacagcaggcactaaacgaatcacgggcg
cttaataatctgctcagtgattcggcgcagaatgcacttttgatgaaaacggcactccgc
attgaaggactgcccagacactactcgacgcacgcggctggagtcgtcttgtcgcaagca
ccattgaatcagctggttccgttgcaaaacggcagcgatggcctcttaatgacgcagttt
cctaaagacacggttgaggcgctgggacttttgaagatggatttcttaggcctgcgcaat
ctgtcaatcatggattcagccctgcgtttgattgaaaaaagccagcctgactttgacctg
catcagatcagtctcaatgatccactgactttaaagctgtttcaaaagggagcaaccgag
ggaatctttcagtttgagtccagcgggattcgtcaggtcttgatacgactgcatccagaa
aactttgagatgatcgtagcggtcaatgctttatatcgtcctggtccaatggataacatt
gcccattttattgcacgtaaggaagggcgtgaaaaggtcactttgcctgatccttcattg
gcatcgattctggcaccgacttatggcattctggtgtatcaagaacaggtaatgcagctg
gccgctaaaatggcgggcttcactttaggacaggccgatctgctgcgccgtgccatgagt
aagaaaaaagccgacgtgatggaacggatgcggggacgctttattaacggagcagttgcc
aatggctattccaggccggttgccgaacaggtttttgaatatattgatcggtttgccaat
tacggcttcaaccgctcacatgccgttgcctactcaatgatggcttttgaaatggcttat
cttaaatgtcactttgcgccggctttttttgccgcgcttttaaatgctcacgcaggatca
gaaaagatgcggacctattttgaggatgccaaatcatttggcgttgtcattgccggtccc
agcatcaactttagtcaggctgattttagtctatatcaggggcgcgtcttgtttggcctg
tccatgatcaagggcgtgcgtcgtgatctgatcagcgagatcctcctaaaaagaaaggat
ggtcagtttgccagcctggctgattttatcggccgcattgatgtcagatttagaaagcct
gagctgattgcgccgctgatctatgctggtgcatttgatcatttgggcagcaatcgcgct
gaaatgattgatgctttggctgacttaatcgagggtgccgagttcaaccaggcgctttca
ggcagcgatacttttcaaacgatgattccggctcgttctgagtatccattggcccagcga
ctggaaaaagagcatgagtatctgggcgtctatctgtcaggacacccggtcagtcagtat
cgatcattggctggtcagctgcacgcggttacggtcgctcagctaagagaaggaatgaac
gcgacactgattctttatgtcagccgcgttaaaacgatcaatactaaaaaaacgcgtcag
ccgatggcattcgtcagcgcttcggatgaaacgggcagcattgaggtaacggtttttccc
aaacagttccagcgttaccaagaactgatcgctgcgcgcaatgtcttgattatcagcggc
cgggtggaaaatcgcaacggcagtctgcagctgctggccagtcgcattcaattggcttct
tctgctggtgagcgcggatcggcgccagccgagacccgctggtttctgcagctgaaaaag
agtgtgctgacgccgcgcttgaccgctcagctgcaggaatttatcggcagtcaccatggc
aacgtgccggtgatggtctactatcccgaaaagcggcagacgcgtctgcttccgcgcagt
cagtggctcagtggggatgaagcaactaaaaaagggctgattgatcttttgggagtcagc
aacgtggtctatcaatccacgccgtaa
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