Limosilactobacillus allomucosae: ABC765_04415
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Entry
ABC765_04415 CDS
T10728
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lalo Limosilactobacillus allomucosae
Pathway
lalo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lalo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABC765_04415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lalo03019
]
ABC765_04415
03400 DNA repair and recombination proteins [BR:
lalo03400
]
ABC765_04415
Enzymes [BR:
lalo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABC765_04415
Messenger RNA biogenesis [BR:
lalo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABC765_04415
DNA repair and recombination proteins [BR:
lalo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABC765_04415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Cas3-like_C_2
TniB
SNF2-rel_dom
AAA_22
AAA_30
QCR10
Motif
Other DBs
NCBI-ProteinID:
XBG96333
UniProt:
A0AAU7C5D0
LinkDB
All DBs
Position
917580..919028
Genome browser
AA seq
482 aa
AA seq
DB search
MDEQRLYQTLKQQFGFDEFRPGQKETIQAVLNQNDVLAVLPTGAGKTLLYQLPAYLMPGS
VLIVSPLISLMQDQVDRLRQHGERQVVMLNATLTGRSRQQVLNRLAAYRFIFASPEILAQ
PSIKHALRKCRISLLVIDEAHCISQWGPDFRPEYLLLKEVKNDLKRPPILLLTATATPRV
QKDILQKMGLDEKNVKRVIRSVNRPNIFLAVDQVENDQQKRQRLAKWLHELGGGGIIYFS
SRKLANELSDWLGEMTGLEVAAYHAGISAIDRFRIQQQFMQGQLQVVCATSAFGMGIDKD
DIRYVIHYHLPGSLESYVQEIGRAGRNQKPALALLMYSPGDEQIQRQLSQIELPSQAVVE
KVQQKKLPGNALGPQAELIEFYLSHGWNYARLTTMLKKRGRLVNQQLAAMLSYVSEKKCR
RANIMRYFGELPVDCPNCCDCHQNDWRLSDLKLPAALDPVVNDQLNWQKQLQFLFAKESK
TS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggatgagcagcggctgtatcaaacgctgaagcagcagtttggctttgatgaatttcga
ccaggtcaaaaggaaacgattcaagccgttttgaatcaaaatgacgtcttggcggttctg
ccaacgggggccggcaagacgctgctgtatcagctgccagcctatctgatgccgggcagc
gtcttgatcgtttcgccgctgatctctttaatgcaggatcaagtcgaccgcctgcgtcag
catggagagcgtcaagtcgtgatgctgaacgctactttaacgggccgctcgcgtcagcag
gtcttaaaccggctggcggcctatcgctttatcttcgcctcgccggaaattctggctcag
ccctcaatcaagcatgcattaagaaagtgccggatcagtctattggtaattgatgaagca
cattgcatctcgcagtgggggcctgattttcgtcctgagtatctgctgttaaaagaagtc
aaaaacgatttgaagcgaccgccaatcctattattgacggccactgccacgccgcgagtt
caaaaggatattctccaaaaaatggggcttgatgaaaaaaacgtcaagcgggtgattcgc
tcagtcaatcgtcccaatatctttttggcagtcgatcaggttgaaaacgatcagcaaaag
cggcagcggctggctaaatggctgcatgagctgggtggcggcgggattatatatttttcc
agccgcaagctggccaatgagctgtcagactggctgggtgaaatgactggacttgaggtc
gcggcatatcacgctggcatctcggcaattgatcgttttcgcattcaacagcagttcatg
cagggccaattgcaggtcgtttgtgctaccagtgcttttggcatgggcattgataaagac
gatattcgctatgtgattcactatcatctgcctggcagtctggaaagctacgtgcaagag
atcgggcgggcgggtcgcaatcaaaaaccggccctcgcgctgttgatgtattcaccaggc
gatgagcagattcaaagacagctcagtcagattgaactgccaagtcaagcagtcgtggaa
aaagtccagcaaaaaaaactgccgggaaatgcgctggggccgcaagctgaattgattgag
ttttatcttagccatggctggaattatgcacgattaaccacgatgctcaaaaaaagaggt
cgtctggtcaatcagcagctggcagccatgctgagctacgttagtgaaaaaaagtgtcgt
cgtgccaatatcatgcgttattttggcgaattgccggttgattgtcccaactgctgcgac
tgtcaccaaaacgactggcggctgagtgatcttaagctgccggcggcgttggatccggtc
gtcaatgatcagctgaattggcaaaaacagctgcagtttctgtttgccaaggaatcgaaa
actagctag
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