Limosilactobacillus allomucosae: ABC765_06595
Help
Entry
ABC765_06595 CDS
T10728
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lalo Limosilactobacillus allomucosae
Brite
KEGG Orthology (KO) [BR:
lalo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lalo03032
]
ABC765_06595 (topA)
03400 DNA repair and recombination proteins [BR:
lalo03400
]
ABC765_06595 (topA)
Enzymes [BR:
lalo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ABC765_06595 (topA)
DNA replication proteins [BR:
lalo03032
]
Prokaryotic type
DNA Topoisomerases
ABC765_06595 (topA)
DNA repair and recombination proteins [BR:
lalo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABC765_06595 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DUF2996
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
XBG94750
UniProt:
A0AAU7C1C1
LinkDB
All DBs
Position
complement(1426353..1428524)
Genome browser
AA seq
723 aa
AA seq
DB search
MATKTVKSTAKTTSAKTKTAKPAAKTTKKTTAKRPKTKKKLVIVESPSKAKTIGKYLGRT
YKVVASLGHVRDLPKSRMGVDIENDYQPDYISIRGKGDVIKELRKDAKQAKAVYLASDPD
REGEAIAWHVANLLKLDTKDKNRVTFNEITKDAVKEAFKEPREINMDLVDAQQARRVLDR
LVGYSISPILWKKVKKGLSAGRVQSVALNLIIQREQAIRDFKPEEYWTIDGQFKKGRDEF
AASFYGENGKKAALPNNEAVQKVLAKIDRKAPFTIDDVTRKERKRMPQPPYTTSTMQQDA
NRRLNFRTRKTMMAAQQLYEGITLGHGSAVGLITYMRTDSTRIASIAKQEASQFIHENYG
EQYAAIKPVKGKLPEGAQDAHEAIRPTSVNRTPAEMKQYLTADQYKLYSLIWSRFVASQM
TPQIVDTMAVSLSQNGVDFHANGSKVKFDGFTKVYKRGQEKDNVLPDLNQGDQVQMISDD
PAQHFTQPPARYTEAALIKTLEENGVGRPSTYAPTLDTIQRRYYVRLVSRHFEPTELGEI
VNQIIVKQFPEIVNVKFTAEVEDDLDRIEEGKENWVKVVDKFYQPFSKEVQAAEEQVAKI
EMHDELAGSNCEICGAPMVVKMGRYGKFHACSRFPNCRNTKAIVKDIGVTCPKCGQGSVV
ERKSKKNRVFYGCSRYPECDFVSWDKPIGRNCPKDGHFLIEKKVKKGKQIVCPNGDYEES
VQN
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcaactaaaactgtaaaatcaactgctaaaacaacttcggccaagacaaaaactgca
aaaccggccgctaaaacaactaagaagacgactgccaagcgccctaagaccaagaaaaag
ctggtcatcgtcgaatcgccttccaaagctaagacgattggcaagtatctgggacggacc
tataaagtcgttgccagcctaggtcatgtccgtgatctgccaaagagccggatgggggtt
gatattgaaaacgactatcagcccgactacatctccattcgcggcaagggtgacgtaatc
aaagaactgcgcaaggatgccaagcaggctaaagcagtctatctggcatctgacccggac
cgggaaggggaagcaattgcctggcacgttgccaatcttttaaaactggatactaaagac
aagaaccgggttaccttcaatgaaattaccaaagacgccgttaaggaagcctttaaggaa
ccacgtgagatcaacatggacctggttgacgcacagcaggcacggcgggttttggatcgg
ctggttggttattcgatcagcccgattctttggaaaaaggtcaaaaagggactgtctgcc
ggacgtgtgcagtcagtcgcactaaacctgatcatccaaagagaacaggcgattcgcgac
tttaagcctgaagaatactggacgattgatggtcagtttaaaaaaggacgcgacgagttt
gcggcatctttttatggcgaaaatggtaaaaaagccgcgctgcctaataacgaagccgtt
caaaaagtgctggccaagattgatcgcaaggcgccgtttacgattgatgacgttacgcgt
aaagaacgtaagcggatgccgcagccgccatacactacctccacgatgcagcaggatgcc
aaccgtcgtctgaacttccgaacgcgcaagacgatgatggccgcccaacagctgtatgaa
gggattacgcttgggcatggcagcgcggtcggtctgatcacctatatgcgtaccgactct
acgcggattgcctcaattgccaaacaggaagcttctcagtttattcatgaaaactatggt
gagcagtatgccgcaatcaagccagtcaagggcaagctgccggaaggggcccaagacgcg
cacgaagcgatccggccaacatcggtcaaccgtacgcccgcagagatgaaacagtatctg
acggctgatcaatataagctctacagcctgatctggagccgattcgtggccagtcagatg
acgccgcagattgttgatacgatggccgtttccttgagccaaaacggggtcgactttcat
gccaacgggtccaaggtcaaatttgatggctttaccaaggtttacaagcgtggtcaggaa
aaagacaatgttttgccggatctaaatcaaggcgaccaggtccaaatgatcagtgacgac
ccggcacagcacttcacgcagccgcctgctcgctatacagaagctgccttgatcaagacg
ctggaagaaaacggggtcggccggccttccacctatgcgccaacgctggacacgattcag
cgccgctactatgttcgtttggtatcgcgccactttgagccaaccgagctgggtgagatc
gtcaaccagatcatcgtcaagcagttcccagaaatcgtcaatgtcaagtttacggccgaa
gttgaagacgacttggaccggatcgaagaaggcaaggaaaactgggttaaggtcgttgac
aagttctaccagccattttctaaagaagtccaggctgctgaggaacaggttgccaaaatc
gagatgcatgatgaacttgccggcagcaattgtgagatctgtggggcgccaatggtcgtt
aagatgggccgctatggcaagtttcatgcctgctcgcgcttcccgaactgccgcaacacc
aaggcaatcgttaaggatatcggcgtaacctgtcctaagtgtgggcaagggagcgtggtt
gagcgcaagtccaagaagaatcgcgtcttttatggctgctcgcgctaccctgaatgtgat
tttgtttcatgggacaagccaattggccgcaattgtcctaaagacggtcatttcttgatt
gaaaagaaggttaagaagggcaagcagatcgtttgtcctaatggcgactacgaagaatca
gtccaaaattaa
DBGET
integrated database retrieval system
