Limosilactobacillus allomucosae: ABC765_09665
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Entry
ABC765_09665 CDS
T10728
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lalo Limosilactobacillus allomucosae
Pathway
lalo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lalo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABC765_09665 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lalo03021
]
ABC765_09665 (rpoC)
03400 DNA repair and recombination proteins [BR:
lalo03400
]
ABC765_09665 (rpoC)
Enzymes [BR:
lalo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABC765_09665 (rpoC)
Transcription machinery [BR:
lalo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABC765_09665 (rpoC)
DNA repair and recombination proteins [BR:
lalo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABC765_09665 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
XBG95303
UniProt:
A0AAU7C2E9
LinkDB
All DBs
Position
complement(2058464..2062102)
Genome browser
AA seq
1212 aa
AA seq
DB search
MIDVNKFESMQIGLASPQKIRSWSYGEVKKPETINYRTLKPEKDGLFDERIFGPTKDYEC
ACGKYKRIRFKGRVCDRCGVEVTSSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVLDAGDTPLEKKQLLSEAEYREKKEEYGDRFTAEMGAEAIQKLLA
DVDLEKEATELKAVLKEATGQKRTRAVRRLDILEAFLKSGNKPEWMVMDVIPVMPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLELNAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVAGPGNRPLKSLSHLLKGKQGRFRQNLLGKRVDYSGRSVIDVGPNLKMNQMGLPVP
MAMELFKPFIMHELTKRGLATNVKAAKRLIDKRDNKVFDVLEDVISEHPVLLNRAPTLHR
LGIQAFEPVLVSGKAMRLHPLVCAAYNADFDGDQMAIHVPLSDEAQAEARLLMLAAHHIL
SPRDGEPIVAPSQDMVIGNYYMTTEDKAREGEGMIFKDANEAYMAYKDGFVALQTRVGVQ
VSSMPKKPFTDEQRSQIMVTSVGKLIFNGIMPEDYYYINEPTNDNLLNGVPEKYFLDKGE
DIHAYLENAPLVPPFKKGFLSDIIAEVYKKYKVTKTSQFLDRIKDLGYYESTISGVTVGI
ADITDLKEKPAIIENAHKQVALVTKQFRRGLITDDERYERVIGIWNDAKDEVQNKLIEHM
DIHNPINMMSDSGARGNISNFTQLAGMRGLMAAPNGKIMELPVLSNFREGLSVLEMFLSS
HGARKGMTDTALKTANSGYLTRRLVDVAQDVVVREKDCGTDRGLDVAAITEGNEMIEPLY
DRILGRYTMKSVFDPETGEKICDKNVLVDEEMAQKIVDAGVKKVTIRSAFTCNTEHGVCE
RCYGRNAATGDKVEAGEAVGTVAAQSIGEPGTQLTLRNFHTGGVAGNDDITQGLPRVQEI
VEARNPKGKATISEVTGEVQSIEENPAERTKDVTIAGENDTRTYTLPITARLKVEEGDYI
HRGMQLNEGSIDPKELIRVRDVLSTETYLLAEVQKVYRMQGIDLLDKHVEIMIRQMMRKV
RVMDPGDTDLLPGELMDISQFRDANRDTLVAGNIPATSRPVILGITKAALETNSFLSAAS
FQETTRVLTDAAIRGKNDPLVGLKENVIIGKLIPAGTGMSNYRNIKPKEVAVAADAPMKS
TSDIEAEMKKQK
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
ttgattgacgtcaataaatttgaaagcatgcagatcggtctggcctcaccacaaaagatc
cgcagctggtcgtacggggaagttaaaaagccggaaacgatcaactaccggacgctgaag
ccggaaaaagacggtctgtttgacgaacgaatctttggtccaaccaaggattacgaatgt
gcttgtggcaagtacaagcggattcgtttcaagggccgcgtttgtgaccgctgtggagtt
gaggttaccagctccaaggtacgtcgcgaacggatggggcacattgagctggccgcccct
gtttctcacatttggtacttcaagggtattcctagtcgaatgggcttggtcttggacatg
agcccacgtgccctggaagaagttatctattttgcttcttacgttgttttggatgccggt
gacacgccactggaaaagaaacaattgctctctgaagcggaataccgtgaaaagaaggaa
gaatacggtgaccgctttactgctgaaatgggtgctgaagccattcaaaaactgttggct
gacgttgacctggaaaaggaagctaccgaattaaaagccgtcttgaaagaagccactggc
caaaagcggacgcgcgccgttcgtcgtctggacattttggaagccttcttaaagtctggc
aacaagccagaatggatggttatggatgttattccagttatgccgcctgatttacggcca
atggtacaactggaaggtggccggttcgcaacttcagatttgaacgatctgtaccggcgg
gttatcaaccgtaataatcgtctgaagcggctgttggaattgaacgcgcctggcatcatc
gttcaaaacgaaaagcggatgctgcaggaagccgtcgatgccctgattgataacggtcgt
cgtggtcgtccagttgctggtcctggtaaccgtccattgaagtcgctctctcacctgctg
aaaggtaagcaagggcgtttccgtcaaaacctgctgggtaagcgtgttgactactctggt
cgttcggttattgatgttggtcctaacctgaagatgaaccagatggggctgccagtacca
atggcaatggaactgttcaagccgtttatcatgcatgaattgaccaagcggggcctggct
accaacgttaaggctgccaagcgcttgatcgataagcgtgacaacaaggtcttcgatgtc
ttggaagacgttatcagtgaacacccagttctgcttaaccgggcacctactctgcaccgt
ttgggtattcaagcctttgaaccggtattggtatctggtaaggcaatgcgtctgcaccca
ttggtttgtgctgcctacaacgccgactttgacggtgaccaaatggctattcacgttcca
ctgtctgatgaggcacaagctgaagcccgtctgctgatgctggctgctcaccatatcctg
tcgcctcgtgacggtgaaccaatcgtggcaccttctcaagatatggttatcggtaactac
tacatgacgaccgaagacaaggctcgtgaaggcgaaggcatgatcttcaaggatgcaaat
gaagcatacatggcttacaaggatggctttgttgccctgcagacgcgagttggggttcag
gtctcttcaatgccaaagaagccatttactgatgaacagcgcagtcagatcatggttacc
agtgttggtaagctgatcttcaacggcatcatgccagaagactactactacatcaatgaa
ccaaccaatgacaatctgttgaatggtgttcctgaaaagtacttcctggacaagggtgaa
gatattcacgcctacttggaaaatgcaccattggttccaccatttaagaagggcttcttg
tctgacatcattgccgaagtctacaagaagtacaaggttaccaagacttcgcaattcctt
gaccgcatcaaggatctgggttactacgaatccacgatttctggtgttaccgtggggatt
gccgatattactgacttgaaagaaaagccggcaatcatcgaaaatgctcacaagcaggtt
gctttggttaccaagcagttccgtcgtggtctgattactgatgatgaacgttatgaacga
gttattggcatttggaatgatgctaaagatgaagttcaaaacaagctgattgaacatatg
gacatccacaacccaatcaacatgatgtctgactcgggtgctcgtggtaacatctccaac
tttactcagctggccgggatgcgtggtctgatggccgctcctaacggtaagatcatggaa
ctgccagtcctttcaaacttccgtgaaggtctttcagttctggaaatgttcttgtcatct
cacggtgctcgtaaaggtatgactgatacggcccttaagactgccaactcaggttacttg
actcgtcgtctggtcgatgttgcccaagacgtggtcgttcgtgaaaaagactgtggtact
gatcgcggtctggatgttgccgcaattactgaaggcaatgaaatgatcgagccgctttat
gatcggattctgggtcgttatacgatgaagtccgtctttgatccagaaactggcgagaag
atctgtgacaagaacgtcttggttgacgaagagatggctcaaaagatcgttgatgctgga
gttaagaaggtaacgatccgctcagccttcacttgcaacactgaacacggtgtctgcgaa
cgctgctacggtcgtaacgctgctactggcgacaaggttgaggccggtgaagccgttggt
acggttgctgctcaatcaatcggtgaaccaggtactcaattgacgctgcggaacttccac
actggtggggttgctggcaacgacgatatcacgcaaggtcttcctcgtgtgcaagaaatc
gtagaagcacggaatcctaaaggtaaggcaacgatttctgaagttaccggtgaagttcaa
tcaatcgaagaaaacccagctgaacggaccaaagacgttacgattgctggtgaaaacgac
acacggacttacacgctgccaatcacggctcgtcttaaggttgaagaaggcgactacatt
caccgtgggatgcaattgaatgaaggttcgattgatcctaaggaactgattcgcgttcgc
gacgttctgtctacggaaacctacctgttggctgaagttcaaaaggtttaccggatgcag
ggtattgatctgctcgacaagcacgttgaaatcatgattcgtcaaatgatgcgcaaggtt
cgcgtcatggatcctggcgatactgatctgttgccgggtgaattgatggatatcagtcaa
ttccgcgatgccaaccgtgacacgctggttgctggtaacattccggcaacgtcacgtccg
gttatcttgggaattaccaaggctgccttggagaccaacagttttctgtctgctgcctcc
ttccaagaaacgactcgtgtcttgacggatgctgctattcgtggcaagaacgatccattg
gttggtttgaaggaaaacgttattatcgggaagctgattcctgccggtactggtatgagc
aactaccgcaacatcaagccaaaagaagttgctgtagctgccgacgcaccaatgaaatca
accagcgatatcgaagccgaaatgaaaaaacaaaagtag
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integrated database retrieval system
