Limosilactobacillus allomucosae: ABC765_10195
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Entry
ABC765_10195 CDS
T10728
Symbol
helD
Name
(GenBank) RNA polymerase recycling motor HelD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lalo Limosilactobacillus allomucosae
Pathway
lalo03420
Nucleotide excision repair
lalo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lalo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABC765_10195 (helD)
03430 Mismatch repair
ABC765_10195 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lalo03400
]
ABC765_10195 (helD)
Enzymes [BR:
lalo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABC765_10195 (helD)
DNA repair and recombination proteins [BR:
lalo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABC765_10195 (helD)
MMR (mismatch excision repair)
Other MMR factors
ABC765_10195 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
AAA_30
UvrD_C
AAA_16
SLFN-g3_helicase
DEAD
Catalase_C
NACHT
Motif
Other DBs
NCBI-ProteinID:
XBG95396
UniProt:
A0AAU7C2R8
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All DBs
Position
complement(2179520..2181823)
Genome browser
AA seq
767 aa
AA seq
DB search
MTESIQQYEQHHLEQVVKEVRKAEEKASGTIENAKRDVKGLSKQFNDIHMNTTTYSGMMD
TAMSVRAQQQMLDERENSWQHAADRLSTLKRLEAKPYFARIDFLEKGAQKPETIYIGLAS
FSDRPDHFLVYDWRAPISSIYYDGKLGPVTYETPVGKQEVDVRLKRQFQIEDGTIVTLYD
TDEAVTDQMLLSALGTHSSTKMKSIVTTIQKTQNEIIRDAKDELLFVQGAAGSGKTAAVL
QRVAWLLYRYRGNLTASQVVLFSPNQLFNDYIDQVLPELGEHNMVQMTYFQYVNRRVPRL
HVQTLQQRFETSQAAVDQNINRLLTSLSSFKAVGVYARALGQRGLRFRNLMFHGKPFFTK
EQIKTIYYSFNRNYNLGNRLDATKDALDHQLRSRVGGAMRSKWAEAAVQSLSKEQMDAMM
NNRPREFESEKQEYNFYAKQIVLKEFAPIHRAIRHNMWININAQYLLFLKALPKMVDLQK
FDLTEQQWAAFIEKTTQNLKERQISAAGISIYLYLYDLLTGKRGERDIRYVFVDEVQDYD
AFQLAYLKFSFPNARFTLLGDLNQAIFTGANSRQLLRQLGTMFDPEKTKVVQLTKSYRST
KQITDFTKHILKDGEKIEAFDRQGKLPSIYQLADLNDAVAQVIAVLKDYQEQHDAVAIIG
KTLADSEQIYQLLAEQGVKATLIRTENQRLVDGVLVVPSYLAKGLEFDAVIVWDANDQKY
HGDSERQLLYTICSRAMHDLTIVSVGQASQLFADVPSQEYELTDRLS
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
ttgacagaatcaatccaacaatacgaacagcatcatttggagcaggtcgttaaagaagtt
cgcaaggctgaggaaaaagccagcggcacgattgaaaacgccaaacgggatgtgaagggc
ctaagcaagcagttcaatgatatccacatgaataccacgacttattcggggatgatggat
acggccatgtcggttcgcgcccagcagcagatgcttgacgagcgggaaaacagctggcag
catgccgccgatcgtttgagtacgctgaagcgcttggaagccaaaccgtattttgcccgc
atcgactttttggaaaaaggtgcgcaaaaacctgaaaccatttatattggcctggcttcg
ttctctgatcgtccggaccactttctggtatatgactggcgggcgccgatctcctcaatc
tattatgacggcaagctgggaccggtcacttatgaaacccctgtcggcaagcaggaggtc
gatgtcagactcaagcgccagttccagattgaggatggcacgatcgtcacgctttatgat
accgatgaggctgtaaccgatcagatgctgctgagcgccttgggaacacactccagcacc
aagatgaagagcatcgtaacgacgattcaaaaaacgcaaaacgaaatcattcgggatgcc
aaagacgaattgctgtttgttcaaggagcggctggttctggcaagacggctgccgtttta
cagcgcgtggcttggctgctgtatcgctatcgtggcaatctgacggccagccaggtagtt
ttgttcagccccaaccaattgttcaacgactatattgatcaggtgctgccagaactgggc
gagcacaatatggttcaaatgacctacttccaatacgttaatcggcgggtgccaagactg
cacgttcagacgctgcagcagcgctttgaaaccagtcaggcggcagttgatcaaaatatc
aatcgcttattgacgagcttaagcagctttaaagcagttggtgtctatgccagagcgctt
ggtcagcggggcctgcgctttcggaatctgatgtttcatggcaaaccgttttttaccaag
gaacaaatcaagacgatctattattcattcaatcgcaactataacctgggcaatcgtctg
gatgcgaccaaagatgcgctggatcatcagctgagaagccgagttggcggggcaatgcgt
tcaaaatgggcggaagcagccgtccaaagcctcagcaaagagcagatggacgcgatgatg
aacaatcggccgcgcgagtttgaatcagaaaagcaggaatacaacttctatgccaagcag
atcgttttaaaggaattcgcgccgattcatcgagcaattcgtcataacatgtggatcaac
attaatgcgcagtatctgctgtttttaaaggctctgccaaagatggttgatctgcagaag
tttgatttgaccgagcagcagtgggcggcatttatcgaaaaaaccacgcagaatctgaaa
gagcggcagatcagtgctgccggcatctcaatctatctctatttgtatgatctgctgacg
gggaagcgcggcgaacgtgatattcgctatgtctttgttgatgaggttcaagactatgat
gcgttccagctggcctatctcaagtttagtttccctaatgcccgctttacgctgctgggc
gaccttaaccaggcaatctttacgggcgctaacagtcggcaattgctgcggcagctgggt
acgatgtttgatcccgaaaaaacgaaagtagtacagctgaccaagtcatatcgctcaact
aaacagattactgattttaccaagcatattctcaaagatggcgaaaaaattgaggccttt
gatcgtcaaggcaagctgccaagcatctaccagctggcggacttaaacgatgccgtcgca
caggtcattgcggttctaaaagactatcaagaacagcatgatgcagttgccattatcggc
aagaccttggctgacagcgagcagatctatcagctgctggctgagcagggcgttaaggca
accttgatccgcactgaaaatcagcggctggttgatggcgtgctggtcgtaccttcatat
ttggcaaaagggcttgagtttgacgcggtgatcgtctgggatgccaacgaccagaagtat
catggcgacagtgagcggcagctgctctacacgatctgttcgcgggcgatgcatgatttg
acgatcgtcagcgtggggcaggccagtcaattgtttgccgacgtgccgagtcaagagtat
gagctgacggatcggttatcatag
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integrated database retrieval system
