Lacunimicrobium album: SH248x_003922
Help
Entry
SH248x_003922 CDS
T11790
Name
(GenBank) sigma-54-dependent transcriptional regulator
Organism
lalu Lacunimicrobium album
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_2
AAA
PDE8A_N
AAA_3
HTH_17
TIP49
HTH_29
Motif
Other DBs
NCBI-ProteinID:
XZE50804
LinkDB
All DBs
Position
complement(4883748..4885166)
Genome browser
AA seq
472 aa
AA seq
DB search
MPDHNTDPADLNRITIRVLVVDDDETHGQAVADSLRRMNCECTVAKTGQRGLELIESDQF
DIVVTDLRMGDVDGLDILEKSKKELPEAEVIILTGHGTINSAVAAMQGGAYTYLTKPLDI
NELRTAVEKASSRVRLIKRNADLRSRLDEKFGFEGVIGSNPAMRNIIEKIRHVAPTDATV
LIQGENGTGKELVARALHENSPRKNKPFVPLNISALPDSILESELFGHEAGAFTGAITRR
IGKFEYANGGTLFLDEVGEMPMDTQIKLLRVLEDRKITRIGQNEEKAVNVRLVAATNAPL
AQMVEEGKFRKDLYYRLKVVDINLPPLRERRDDITLLMDHFLKDFTRIYNKEVVGISRSA
RLALRQYDWPGNIRELRNVMERMLLLDTDGILDVNDLPDEISPLPADAEEQLANSASGGQ
DALIGKDLREVEKYYIRKALEITDGKREEAANMLGMGERTLYRKIKEYDLKS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatcacaataccgatcctgctgatctcaaccgtattaccattcgcgttctcgtc
gttgatgacgatgagacgcacgggcaggcggttgcggatagtcttcgacgcatgaattgc
gagtgcacggtcgcgaagaccgggcagcgggggcttgagttgattgagagcgatcagttc
gacatcgtcgttactgacctgcggatgggcgatgtcgatgggctcgatattctggagaag
tccaaaaaggaacttccggaagccgaagtcatcatcctcaccggtcatggcacgatcaac
tccgcggtcgcggcgatgcaggggggcgcttacacctacctgaccaagccgctcgatatt
aatgagcttcggactgcggtcgaaaaggcctccagtcgggtgcgtctgattaagcggaac
gcggatctgcggagtcgtctcgacgagaaattcggcttcgagggggtcattggcagtaat
cctgccatgcgaaacatcatcgaaaaaatcaggcacgtcgccccgacggatgcgaccgtt
ctcatccagggggaaaacggaacggggaaagagctcgtcgcccgcgcactgcatgagaac
agcccgcgtaagaataagccgtttgttccgctgaatatctctgcccttcctgacagcatt
ctcgaaagcgaactcttcggtcacgaagccggcgcgtttacgggagccatcacgcgacgg
atcgggaaattcgagtacgccaacggcgggacgttgttcctggatgaagtcggcgagatg
ccgatggatacgcagatcaagctgctgcgcgttctggaggaccgcaagattacccgcatc
gggcagaacgaggaaaaggcggtcaacgtccgcctggtcgctgcgacgaatgctccgctg
gctcagatggttgaagaaggcaagttccgcaaggacctttactaccggctgaaagtcgtc
gacatcaatctgccgccgttgcgggaacgtcgcgatgacatcacgctgctgatggatcac
tttctcaaagatttcactcggatctacaacaaggaagtcgtcggcatctcgcgatcggcc
cgccttgcgctgcggcaatacgactggcctggcaatatccgggaacttcgcaatgtgatg
gagcggatgcttctgctcgatacggatggaatccttgacgtcaatgacctccccgacgag
atcagcccgctgcctgcggatgctgaagaacagctcgccaattctgccagcggcggtcag
gatgccctgatcggcaaggacctgcgagaagtggaaaagtattacatccgtaaggcgctg
gaaatcacggatggcaaacgggaagaagctgccaacatgctcggcatgggggagcgcacg
ctgtatcgcaagattaaagaatacgatctgaagagctga
DBGET
integrated database retrieval system
