Companilactobacillus allii: BTM29_08195
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Entry
BTM29_08195 CDS
T05413
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lalw
Companilactobacillus allii
Pathway
lalw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lalw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BTM29_08195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lalw03400
]
BTM29_08195
Enzymes [BR:
lalw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BTM29_08195
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BTM29_08195
DNA repair and recombination proteins [BR:
lalw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BTM29_08195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
Zn_ribbon_TFIIB
RNHCP
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
APX72529
UniProt:
A0A1P8Q400
LinkDB
All DBs
Position
1682605..1683432
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AA seq
275 aa
AA seq
DB search
MPEMPEVEIVRRGLMSQIQGRKITNVEIRYQNLITGDVSQFIDMVTGSVIEDIGRRAKFL
LIHLDNGFTIISHLRMEGKYRVSSDPSMIDKHSHAIFTLDNGQKLIYNDVRKFGRMQLWR
TSDLIDNRSIAKLGPEPLSTEFTFDNLKSRILRHRRDIKTVLLDQSVMSGLGNIYVDEVL
WNALIHPETKANHLSDEDIKNILKYSNEEMKMGIAEGGSTVRSYLDSTGHAGHMQDFLHV
YGKEGTPCSRCGNNIEKIKVGGRGTHFCPHCQVVK
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagatgccagaagtagaaatagttagacgtggattgatgtctcaaatccaaggt
cgaaaaatcacaaatgtggagataaggtatcaaaatctaattacaggtgatgtatcacaa
tttattgatatggtaactggtagcgttatcgaagatattggacgtcgtgctaaattttta
ttgattcatttagataatggatttacaatcattagtcatcttcgaatggaaggtaaatat
cgtgtatcgagtgatccaagcatgatagataaacattcacatgcaatatttactttggat
aatggtcaaaagctgatttataatgatgttcgaaaatttggaagaatgcagttatggaga
acgtctgatctaattgataacagatcaatcgccaaattagggccggagccgttatctact
gaatttacttttgacaatttaaaatcacgaatactgagacatagaagagatataaaaact
gtcttactagatcagtcagttatgagtggattgggtaatatttacgttgatgaagtatta
tggaatgcattgattcaccctgaaactaaggcaaaccatctaagtgatgaagatattaaa
aatattttgaagtattctaatgaagagatgaagatgggaattgctgaaggtggatcaact
gttagatcatacttggattcaacaggacatgctggtcatatgcaagactttctccatgtt
tatggtaaagagggtacaccttgttcaagatgtggtaataacattgaaaaaatcaaagtt
ggtggtcgcggtacgcacttttgcccacattgtcaggtagttaaatga
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