Companilactobacillus allii: BTM29_08770
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Entry
BTM29_08770 CDS
T05413
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lalw
Companilactobacillus allii
Brite
KEGG Orthology (KO) [BR:
lalw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lalw03016
]
BTM29_08770
Enzymes [BR:
lalw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BTM29_08770
Transfer RNA biogenesis [BR:
lalw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BTM29_08770
Prokaryotic type
BTM29_08770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
SF3b1
Motif
Other DBs
NCBI-ProteinID:
APX72638
UniProt:
A0A1P8Q457
LinkDB
All DBs
Position
1789950..1790858
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AA seq
302 aa
AA seq
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MNGVIPLNKEIGMTSSDYVYKLRKILHTKKIGHTGTLDPLVDGVLPICVGQSTKLVNRLT
GSSKEYVGEITLGKSTTTEDREGDIVKEVKLTKPFSDEELHEVFEKMIGELVQIPPMYSA
VRVNGKKLYEYARAGIEVERPKRQIHIYDFNIVGEPEFDTELGIQKVKFHVTCSKGTYVR
TLAVEYGEFLGVPSFMSQLTRTKSADFNIEETFKLDEIRKMMDEDDHSFLRSTDEVLSYM
QAHELSDEEWEVRVLHGGFLDLDNYDYDKDLRVTRNHVTKAIYKYNEERQLWIPDTMLLN
ND
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaacggagtaattcctctaaataaagagatcggaatgacaagttctgattatgtatat
aagttacgtaaaattttgcatacaaaaaaaattggacatacaggaacgctagatccattg
gtagatggtgtattgccaatttgtgttggtcagtcaactaaacttgtaaacagactgacg
ggttcatctaaagaatatgttggcgagatcacattagggaaatcgaccacgacagaagat
cgtgaaggggatatagttaaagaagtaaagcttactaaacctttttctgatgaagaatta
catgaagtatttgagaagatgattggcgaattagtacaaattccgccaatgtattcagca
gttagagtcaatggtaaaaagctatacgaatatgcccgtgctggtattgaagttgaacgt
cccaaacgtcaaatacatatttatgatttcaatattgtcggagaaccagaatttgatact
gaacttggtattcaaaaagtaaaattccacgttacatgttcaaaaggtacatatgtaaga
actttagccgttgaatatggtgaatttcttggtgtaccttcatttatgtcacaattaaca
agaaccaaaagtgctgattttaatatcgaagaaacatttaagcttgatgaaataagaaaa
atgatggacgaagacgaccactcctttttaagaagtactgatgaagtattatcctatatg
caagcacatgaattgagcgatgaagagtgggaagtacgtgtccttcatggtggattttta
gatttggataattatgattatgataaagatttaagggtgacaagaaaccatgtgactaag
gcaatttataaatataacgaagaacgtcaattatggattcctgatacgatgcttcttaac
aatgattag
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