Companilactobacillus allii: BTM29_09840
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Entry
BTM29_09840 CDS
T05413
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lalw
Companilactobacillus allii
Pathway
lalw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lalw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTM29_09840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lalw03019
]
BTM29_09840
03400 DNA repair and recombination proteins [BR:
lalw03400
]
BTM29_09840
Enzymes [BR:
lalw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BTM29_09840
Messenger RNA biogenesis [BR:
lalw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BTM29_09840
DNA repair and recombination proteins [BR:
lalw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BTM29_09840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
APX72831
UniProt:
A0A1P8Q4P0
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All DBs
Position
complement(1996270..1998084)
Genome browser
AA seq
604 aa
AA seq
DB search
MKLDPQSVLKDVFGYDNFRPGQGKIINHVLNGDRTLGIMPTGGGKSVCYQLPAIMFDGLT
LVVSPLISLMKDQVDSLNEMNIPATFINSTLDYRDQEERMRYIESGAVKLLYAAPERIEN
PEFYSWLVQLPIDLVSIDEAHVLSAWGHDFRPSYLNIIESLNKLPSNPSWLALTATATSR
VQDDLVDILNIPEENIVKTGFARDNIALKIERGVSKLSYVLNYVKSHINESGIIYAGRRK
DVDTIYEYLNSHGVKAGRYHAGLDDEERHRQQEDFLFDEVNIIVATNAFGMGINKTNVRY
VIHFTIPGTIESYYQEVGRAGRDGLPAEAILLYTPADLGLHRFFIDQSEADDDYKQSLNE
KLREMNQYAMTEVCLMRYILRYFGEITDKNCGHCSNCLDNRETTDVTHDSQKVLSCVVRM
DQKYGKKVLGRVLAGKADVANDWRNFGKLSTFGLMHDWTLKSINEFIEYLTANGYLMTTG
GQYPLLRLTKKGVLVLKGEATVARRLVVVASGPVKEIANDGTYDTNLFEKLRKLRIDIAH
AQDVPPFVIFSDKSLRDMSQKMPQNSNEFLAVNGVGNAKLERYGQRFIETIKEYENEKNE
EVKN
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
attaaattggatccgcaatcagtcttaaaagatgtctttggttatgacaattttcgacca
ggacaagggaaaataattaatcatgttttaaatggtgatcgtactttgggtattatgcca
acaggtggtggaaaatctgtttgctaccaacttccagcaattatgtttgatggtttaaca
ttagtagtttcgccattaatatcgttaatgaaggatcaagttgatagtttgaacgaaatg
aatatcccagctacctttattaacagtactctcgattaccgtgatcaagaggaacgtatg
cgttacattgaatcaggagccgtaaaattattgtatgctgctcctgagcgtatcgagaat
cctgaattttacagttggttagtgcaattacctattgatttagtatctattgacgaagct
catgttttgtctgcctggggccatgattttcgccctagttatttaaatatcattgaatcc
ttgaataaattacctagtaatccatcatggttggcattgactgcaacagcaacaagtcgt
gttcaagatgatttagtcgatatattgaatattccagaagaaaatattgtgaagactggt
tttgctagagataatattgctttaaaaatagagcgtggtgtaagtaaattatcatatgtc
ttaaattatgttaaatctcacattaatgagtctggaattatttatgctggaagacgcaaa
gatgttgatacaatttatgaatatcttaattctcatggtgtaaaggccggtagatatcat
gctggtcttgatgatgaagaaagacatcggcagcaagaagactttttatttgatgaagta
aatattattgttgccacaaatgcatttggaatgggtataaataagaccaacgtgcgttat
gtgattcattttactattccaggtacaattgaaagttactaccaagaagtgggtagggca
gggcgagatggactaccagcggaagctatcttgctatatacaccagcggatctgggactt
cataggttcttcattgatcaatctgaagccgatgatgattataaacaaagtttgaatgaa
aaattacgagaaatgaatcaatatgcgatgacggaagtatgtttgatgcgctatatttta
agatactttggtgaaatcacagataagaattgtggtcattgttccaactgcctagataat
agggagaccactgatgttacacatgattctcaaaaggtattgagttgtgtagtaagaatg
gatcagaagtatggtaaaaaggtcttaggccgcgttttagctggaaaggctgacgttgcg
aatgattggcgtaattttggtaaactatcaacatttggattaatgcacgattggacatta
aaatctattaatgaatttattgaatatttaaccgcaaatggatatttgatgacgacaggt
ggtcaatatccgctacttaggttgactaagaagggtgttttggtattaaagggtgaggct
actgtagctagaagattggtagttgtagcctctggtccggttaaagaaattgcaaatgat
ggaacctatgatactaacttgtttgaaaaattacgtaaattgcgtattgatattgcacat
gcacaagatgtaccaccatttgttattttttctgataaatcattacgtgatatgtcacaa
aaaatgcctcaaaattcaaacgaattcttggctgttaatggtgttggtaacgcaaaactt
gaacgatacggtcaaagatttatcgaaacaataaaagaatatgaaaatgaaaaaaatgaa
gaagtcaaaaattaa
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