Lactobacillus amylovorus GRL 1112: LA2_01680
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Entry
LA2_01680 CDS
T01371
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lam
Lactobacillus amylovorus GRL 1112
Pathway
lam03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lam00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LA2_01680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lam03021
]
LA2_01680
03400 DNA repair and recombination proteins [BR:
lam03400
]
LA2_01680
Enzymes [BR:
lam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LA2_01680
Transcription machinery [BR:
lam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LA2_01680
DNA repair and recombination proteins [BR:
lam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LA2_01680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF961
Motif
Other DBs
NCBI-ProteinID:
ADQ58329
UniProt:
E4SKZ3
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All DBs
Position
330910..331848
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPNITVVEQEDSYGKFVVEPLERGFGTTLGNSLRRVLLTSIPGTGLVYVQIDGVL
HEFSTVPGVREDVTKIILNLKKLELKSLSDEQKVIELDVEGPATVTADDLKVDADVQVLN
PDQYICTIAEGGHLHMELAVKNGRGYVTASDNKSDDMPIGVIPVDSLFSPIKKVNYQVES
TRVGKRDDFDKLTFEIWTDGSIKPNDALSFAAKILVEHFKVFESADANTQFSEVMVEKED
DKKEKKLEMTIEELDLSVRSYNCLKRAGINTLQELTDKTESDMMRVRNLGRKSLEEVKNK
LADLGLSLRQED
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatttgaaaaaccaaatattaccgttgttgaacaagaagattcttacggtaag
tttgttgttgaaccacttgagcgaggctttggtactactttaggtaattctttaagaaga
gttttacttacttctattccgggtactggacttgtttatgtgcaaattgatggcgtttta
cacgagttctcaacagttcctggcgtcagagaagatgtaaccaaaattattctgaacttg
aagaaacttgaattaaagtctctttcagatgaacaaaaggttattgaattagacgttgaa
ggtcctgccacagtaactgctgatgatcttaaagttgatgcagacgttcaagtcttgaat
ccagatcaatatatttgtaccattgctgaaggtgggcatttacatatggaactcgccgta
aagaatggtagaggatatgtaactgcaagtgacaataagagtgatgacatgccaatcgga
gtaattcctgttgattcattattctcaccaattaaaaaggttaactaccaagttgaatca
actcgtgttggtaagagagacgatttcgacaagctcacttttgagatttggactgacggt
tcaatcaagcctaatgacgcccttagttttgctgctaagatcttagttgaacacttcaag
gtatttgaatcagctgatgcaaatactcaattcagcgaagtaatggtggaaaaggaagac
gataagaaggaaaagaagcttgaaatgacaattgaagagcttgacctttctgttcgttca
tacaactgcctgaaacgtgccggcattaacactcttcaagagttaactgataagacagaa
tcagatatgatgcgtgtacgtaacttaggacgtaaatcattggaagaagttaagaataaa
ttagccgacttaggtctttcacttcgtcaagaagactaa
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