Lactobacillus amylovorus GRL 1112: LA2_01960
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Entry
LA2_01960 CDS
T01371
Name
(GenBank) DNA polymerase III, gamma/tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lam
Lactobacillus amylovorus GRL 1112
Pathway
lam03030
DNA replication
lam03430
Mismatch repair
lam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LA2_01960
03430 Mismatch repair
LA2_01960
03440 Homologous recombination
LA2_01960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lam03032
]
LA2_01960
03400 DNA repair and recombination proteins [BR:
lam03400
]
LA2_01960
Enzymes [BR:
lam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LA2_01960
DNA replication proteins [BR:
lam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LA2_01960
DNA repair and recombination proteins [BR:
lam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LA2_01960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_22
TIP49
AAA_5
AAA_assoc_2
AAA_30
AAA_19
AAA_24
AAA_7
AAA_16
AAA_14
AAA_2
Mg_chelatase
RCF1-5-like_lid
DUF815
Rad17
PIF1
AAA_18
PLCB1-4-like_EFh
Pox_Ag35
MbeD_MobD
Motif
Other DBs
NCBI-ProteinID:
ADQ58383
UniProt:
E4SL47
LinkDB
All DBs
Position
374674..376482
Genome browser
AA seq
602 aa
AA seq
DB search
MAYQALYRKWRPRTFDSVIGQEAITDTLKNAIIRGKVSHAFLFAGPRGTGKTSCAKIFAK
ALNCTNLQDGEPCNKCANCIAADQGSMPDIMEIDAASNNGVDEIREIRDKVKYAPTEGKY
KVYIIDEVHMLSMGAFNALLKTLEEPPEHVVFILATTELQKVPATIISRTQRYNFKRISK
ADLEKRMKYILDQENIKYEDKAIAVIAQVADGGMRDALSILDQLLSYEKESVNYEDALQI
TGFADRKNVEQILLKLLSKDAPAALKLAQEELDKGASSKNILDELVDMATKSLMIIKTGD
DDKNMFLSEDFIAKIKDVPTSTYYRLITLANKALNDLRYTNQQQIPLEVFLVEATTSESK
QVAASTSALVAKTAPVPQQGSTDISAELAALKNQVVELTQKVQQLSKRPSFAKDQVFQLD
TAIPKSVPKAKAKPAEPVKKKPVKNIKKTTAENRKQVYHVLENATRDNLNTIKNVWPDLQ
SVLAVSERALLDVLEPVAASPDQVVMKCKYTLWFENASSDSDLLEKLTSYIEKFAKHYYG
IVLVPDSDWLAVRKEFVESHKAELLAKKKQQIEDKEEADSKEDTEVIDKAKDLFGDAVTI
KD
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcaagcactatatcgaaaatggcggccacggacttttgatagtgtgattggt
caagaagcaattaccgatacgcttaaaaatgcgattatccgaggcaaagtttctcatgca
ttcttgtttgcgggacctcgtggtactggtaagacctcttgtgccaagatatttgcgaaa
gcattaaactgtactaatcttcaagatggtgaaccatgcaataaatgcgccaattgtatt
gcggcagatcaaggatcaatgcctgatattatggaaatcgatgcggcttccaacaacggt
gttgatgaaatccgtgaaattcgtgataaggtaaagtacgctccaacagaaggaaagtac
aaagtttacatcatcgacgaagttcatatgctctcaatgggtgcttttaacgcattgctt
aaaacgctagaagagccaccagagcatgtcgttttcattttggcaacgacagaattgcaa
aaagtaccagctacgatcatttctagaacgcagcgctacaattttaaacgaatttccaag
gctgatcttgaaaagagaatgaagtatattctcgatcaagaaaatattaaatacgaagat
aaggcaattgcggtcatcgcacaggtagctgatggtgggatgcgtgatgcgctcagcatt
ttggaccagctgcttagttatgaaaaagaaagcgtcaattatgaagatgctttgcagatt
actggttttgctgatcgtaaaaatgtcgaacaaattttgcttaaattattaagtaaagat
gcacccgctgctttgaagctagctcaagaagaattagataagggtgctagctccaagaac
atcttggatgaattagtcgatatggccaccaagagcttgatgatcatcaaaacaggcgat
gacgataaaaatatgtttttatcggaagactttatcgctaaaataaaagatgtacctact
tcaacatattatcgtttgattactttggctaataaggcattgaacgatttgcgctatact
aaccagcaacaaattccattggaagtattcttggtagaggctactacaagtgaatcgaaa
caagtagcagcatcaacatctgcacttgtagctaagactgcaccagtaccacaacaaggt
agtacggacatttctgcggaactcgccgctttaaagaatcaagtggttgaattaacgcaa
aaagttcaacagctttccaagagaccatcttttgcaaaagatcaggtttttcaattggat
acggcgattccaaaatcagtgcctaaggcgaaggccaagccggctgaaccagttaagaaa
aagccagtcaaaaatatcaaaaaaactacagcagaaaatcgcaaacaggtttatcatgtt
cttgaaaacgccactagagataatttaaataccatcaaaaatgtgtggcctgatttgcaa
tctgtcttggcagtttctgaaagagcattgcttgatgtacttgaaccagtggcagctagt
cctgatcaagtagtcatgaaatgcaagtatactttgtggtttgaaaatgctagttcagat
agtgatttgctggaaaaattaacgagttatatcgaaaagtttgctaaacattattatggt
atcgttttagtcccagatagtgattggctggcagtaagaaaagaattcgttgaaagtcac
aaggctgaattattagctaagaaaaagcaacaaatcgaagataaagaagaagcagactcc
aaagaagataccgaagtaattgataaagctaaggatctattcggggatgcagtaaccatt
aaagattaa
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