Lactobacillus amylovorus GRL 1112: LA2_02160
Help
Entry
LA2_02160 CDS
T01371
Name
(GenBank) putative RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lam
Lactobacillus amylovorus GRL 1112
Brite
KEGG Orthology (KO) [BR:
lam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lam03019
]
LA2_02160
03009 Ribosome biogenesis [BR:
lam03009
]
LA2_02160
Enzymes [BR:
lam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LA2_02160
Messenger RNA biogenesis [BR:
lam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LA2_02160
Ribosome biogenesis [BR:
lam03009
]
Prokaryotic type
rRNA helicases
LA2_02160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
DsrH
Motif
Other DBs
NCBI-ProteinID:
ADQ58423
UniProt:
E4SLG5
LinkDB
All DBs
Position
415539..416900
Genome browser
AA seq
453 aa
AA seq
DB search
MNNIFEDSRIKPAVQAGLKKIHFEKPTKVQEKVIPAMLSDLSVVVQAATGSGKTHAYLVP
IFNEIDEAAHTVQAIITLPSRELADQLYQVARELRKASGMNFSIAHLAGGTDRERQLEKY
QNNTPQLVIATPGRLLDFVQKKVFAVDQVKTFVIDEADMTLDMGFLADIDQVAAKLPKDV
QIAAFSATIPVKLSNFLRKYMAHPDQIVIDNPSVIAPTIKNDLIDIGSKNRKSVLYKLLT
MGQPYLALVFANTKQTVDELTKYLQDQGLKVAKIHGGVTERERKRTLRQVEQGQYQYVVA
SDLAARGLDIDGISLVINYEIPRDIEFVIHRIGRTGRNGLSGHAITLIREEEMNRIEELE
KMGVHFDFVEIKNGELVPRKHYRSRENRQSKNRKLDTKLVGYVKKEKRKRKPGYKKKIKR
AIAEDNRQKRKLEQRHEIRKAKRQRKRRREQGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaataatatttttgaagattccagaattaagcctgccgttcaagccggtttaaagaag
atccactttgaaaagccaactaaggtgcaggaaaaggttattcctgcaatgctttctgat
ttaagcgtagtagttcaagctgctacaggatcaggtaagacgcatgcatatttggtgcca
atttttaatgaaattgatgaagctgctcatactgtgcaagcaattattactttgcctagt
cgtgaattagctgatcaactttatcaagtagcacgtgaacttagaaaagcttcagggatg
aacttttcaattgctcacttggctggcggaactgacagagaacgtcaacttgaaaagtac
caaaataatacgccacagttagtaattgcgacacctggtcgacttttggactttgtacaa
aagaaggttttcgcagtagatcaagtgaagacctttgtcatcgatgaagctgatatgacg
ttagacatgggctttttagcagatatcgatcaagtagccgctaagttgcctaaggatgtt
caaattgcagccttctcagctacaattccagttaagttgtctaactttttgcgtaaatac
atggctcaccctgaccaaatcgtcattgataacccaagcgtaattgcaccaacgattaag
aatgacttaatcgatattggttctaagaaccgcaagagcgttttgtacaagttgcttacg
atgggccaaccatatttggctttagtctttgccaatactaaacaaaccgttgatgaattg
accaagtacttgcaagatcaaggcttaaaagtagccaagattcacggcggagttaccgaa
agagaaagaaaaagaactctgcgtcaggttgaacaaggtcaatatcaatacgttgtagcc
agcgatttggccgctcgtggcctagatatcgatgggattagtttggtcattaactacgaa
attccacgtgatattgaattcgttattcaccgaattggtagaactggtcgaaatggttta
tcaggtcatgctattaccttgattcgtgaagaagaaatgaaccgcattgaagaacttgaa
aagatgggcgttcactttgactttgtcgaaattaagaatggcgaacttgtaccacgtaag
cactaccgcagtcgtgaaaatcgtcaaagcaagaaccgcaagcttgataccaagttagtt
ggctacgttaagaaagaaaagagaaagcgtaagccaggctacaagaagaagatcaagcgt
gcaattgccgaagacaatcgtcaaaagcgcaagcttgaacaacgtcatgaaattaggaaa
gctaaacgacaaagaaaacgtcgtagagagcaagggcgttga
DBGET
integrated database retrieval system
