Lactobacillus amylovorus GRL 1112: LA2_06560
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Entry
LA2_06560 CDS
T01371
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lam
Lactobacillus amylovorus GRL 1112
Brite
KEGG Orthology (KO) [BR:
lam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lam03400
]
LA2_06560
Enzymes [BR:
lam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LA2_06560
DNA repair and recombination proteins [BR:
lam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LA2_06560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
DEAD
ResIII
Herpes_ori_bp
AAA_30
AAA_16
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
ADQ59257
UniProt:
E4SJH8
LinkDB
All DBs
Position
complement(1255851..1259468)
Genome browser
AA seq
1205 aa
AA seq
DB search
MPQFTKEQEKAINDRGHDILVSASAGSGKTTVLVERVLREILAGTQVSELLVVTFTKAAA
EEMKTRIKNALTQEMAKPGVNRRYLREQLNQVDTANISTIDAFCLEVIHRFYYSVDLDPS
FQILTDETQAALLKERALREVEGEFLTNKDSDFRRFYDNFAGDRDADSPRDLLLDLYNYA
MAKPEYHAWLMQLPEVYETGAEITQSNLWQNQIKPYLLDSFKGLENKINGRLEETIFETK
ELKKVREDFSLFDQNLQNFLAALDEDKPYDEQRDLLRLCTFNGRYRKSSKWDEDLLEFYG
DLQKLKDEAKSQVFDTFTAFFATDEKEQVKVMQDGQKIVAAIAQAEIALIERFNKLKRDE
NLIDYSDMEQLAYRILSQDTSSSQMARDFYQSKFKEILVDEYQDINALQENIIQQVRQPG
KNTLFMVGDVKQSIYGFRQAEPSLFLRKYHDFAQEQNEHEERILLSDNFRSTEPVTRTVN
HLFNSILSSNFGGIDYQKEGQLVFGAKYYPSNLPKASEVIIHKKERGGDENSDKVDFSEI
QMVLARIKQLKEEHMQVFDSKSGQMREMKYSDIAILTRSHSDNLEIMQEFAKQDIPLFVT
DAENYFQTFELTVIMNYLKIIDNPDQDIPLVTVLRSPLFNFGEKDLAKIRIKSKNSSFYS
ALTSYVGVGDQLSDKCKDFLNQLASLREFATTHRISELIWSIYTRTNLLEIMTALPNGEQ
RRVNLEALYERATSYESAGFKGLYQFINFINRMRQSQKDLAQPLLTKEAGNAVRLMTIHG
SKGLEFPIVFYLGMHHQYQLRDLKGDYVINADGLGVTLREEHYRIDSLVKAMGNITKKRQ
LLEEEARILYVALTRAKQKLIMVGDIPSFDKKVKDWSNELDHEGQLSLADKLAATTPLSF
MGPALAFDRRVAMRISDITNSLDQSQPILFVDFSDDAIANNAVNEEKETRKDSEPEIKKL
TETATKLYQFDYPFKDAIATTAYQAVSEIKKAFNDPDEAELENSHLLASTNRYLQPIDTK
PSFLYQTKFTGAEIGTATHLILQYYDYTGDGSDEQLEQEIQHLIEQKKLNADIVSSLKKD
QIEWFVHSDFAKDFWQRPEDLKREVDFSSLLSARTLFDDFSDPNAKILVHGTIDGYFIIN
NGIILFDYKTDHVDKSHLDEAIELIKEKYTGQLRLYERALNEFSTKKVIGKYLILLDAKQ
AVEVK
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
ttgccacaatttactaaagagcaagaaaaagcgatcaatgatcgtggacacgatatttta
gtttcagcttcggctggtagtggtaaaactacagtcttggttgaacgggttttgagagaa
attttggcaggaacgcaagtaagtgaactgttggttgtgacatttactaaagcagctgca
gaagaaatgaaaacgagaataaagaatgccttgacgcaagaaatggctaagccaggcgtc
aatcgaagatacttgcgagaacaactgaatcaagtggatactgccaatatctcaactatt
gatgctttttgtcttgaagtaattcatcgtttctattattcagtagatttagatcctagt
tttcagattctaaccgacgaaacgcaggcagctttattaaaagaacgtgctttgcgagaa
gttgaaggtgaatttttaactaataaggattctgactttagacgtttttatgataatttt
gctggtgaccgggatgctgacagtccgcgagatttgttattagatttgtataactatgcg
atggctaagccagaatatcatgcctggttaatgcaattgccagaggtgtatgaaactgga
gctgagattactcagtctaatttatggcaaaaccaaattaagccatacttattagatagt
tttaagggcctagaaaataaaatcaatgggcgcttagaagagactatctttgaaaccaag
gaactaaaaaaagtcagagaagacttcagtttgtttgatcaaaacttacagaatttcttg
gcggccttggatgaggataaaccatatgatgagcaaagagatttgctgcgtttgtgtact
tttaatggtagataccgcaagtcgagtaaatgggatgaagatctgctagagttctacggt
gatttgcaaaagttaaaagatgaagccaaaagtcaagtctttgatacctttacggcattt
tttgccaccgatgaaaaagaacaagtaaaggtaatgcaagatggtcaaaagatcgtagct
gcgattgcgcaagctgaaatagccctaattgagcgttttaacaagttaaagcgcgatgag
aacctgattgattatagtgatatggagcaattagcctatcgcattctcagtcaggatacg
tctagctcacagatggctagagatttttatcaaagtaagtttaaagaaattctggttgac
gagtatcaggatattaatgctctgcaggaaaatattattcaacaggttagacaaccaggg
aagaataccttgttcatggtaggggatgtgaagcagtcaatttatggctttagacaagct
gaacctagtttgttcttaagaaagtatcatgattttgctcaagaacaaaacgaacatgaa
gaacgtattttgctttcggataattttagatcaaccgagcctgtaactcgtaccgtcaat
catctgtttaatagcattttgagttctaattttggtggaattgattatcaaaaagaaggg
caattggtttttggtgccaaatattatccaagcaatttgcctaaggctagtgaggtaatc
attcataaaaaagaaagaggtggagacgaaaacagcgataaggtcgatttttcagaaatc
caaatggttttagcacgaattaagcagctaaaagaagagcacatgcaggtattcgatagt
aaaagcggacaaatgcgtgagatgaagtacagtgatattgctattttgactagaagtcat
agtgataatctggagatcatgcaggaatttgccaaacaagatatccccttgtttgtgact
gatgccgagaattattttcaaactttcgaattaactgtcattatgaattatctgaaaatt
atcgataatcctgatcaggacattcctctggttacggttttgcgttcaccactctttaat
ttcggtgaaaaagacttggctaagattagaattaagagtaaaaacagcagtttttatagt
gcccttacttcatatgttggtgtgggagatcagctcagcgataaatgcaaagactttttg
aatcaattggcatcgctgcgtgagtttgcgactacgcacagaatttctgaattaatttgg
agtatttatacacgaaccaatctgttagaaatcatgactgctttgcctaatggtgagcag
cgtcgggtcaatttggaagcactttatgagagagctacttcttatgaaagtgctggcttt
aaaggattatatcaattcatcaactttattaatcgcatgcgtcaaagtcaaaaggattta
gctcaaccgcttttaactaaagaggcgggaaatgcagtaagattgatgactatccacggt
tctaaggggctggaatttccaattgtcttttatttagggatgcatcatcagtatcagttg
cgcgatttaaagggtgactatgtcattaatgctgatggtttaggtgttaccttaagagag
gagcattatcgaattgactccttagttaaggcaatgggtaatattactaagaaaagacaa
ttgcttgaagaagaagctcgtattctctatgtagctttaacgcgggctaagcaaaagtta
attatggttggtgatattcctagttttgataaaaaggtcaaagactggtctaacgagttg
gatcatgaaggtcagttatcattggcagataaattagctgcaacaacaccattaagcttt
atgggccccgcattagcttttgatcgtcgtgtagcaatgagaattagtgatattacgaat
tcgcttgatcagagtcagccaattctcttcgtagatttttcagatgatgcaattgcaaat
aatgctgtcaatgaagaaaaggaaactcgtaaagatagcgagccagaaattaaaaaactg
acagaaactgctactaagctttatcaatttgattatccttttaaagatgcaattgcaact
actgcttaccaggctgtttctgaaattaaaaaggccttcaatgacccagatgaagcagag
ctggagaattcgcatttgctggcctcaactaaccggtatttgcagccgatcgatacgaaa
ccaagtttcctctatcaaactaagtttaccggggcggagatcggtactgccacacacttg
attttgcaatactatgattatactggtgacggaagtgatgaacagcttgagcaagagatt
cagcatttgattgaacagaagaaattgaatgcggacattgtttcgagtcttaaaaaagat
caaattgaatggtttgtccatagtgattttgctaaagatttttggcaaagaccagaagat
ttaaaaagagaagttgatttctctagtttgctgtctgccagaaccttgtttgatgatttt
agtgatccaaatgcaaaaattttggttcatggtacgattgatggctattttattataaat
aatggtattattttgtttgactacaaaactgatcatgtagacaaatcgcatttagatgaa
gcaatagaattaattaaagaaaaatataccggacagcttcgtttatatgaacgagcatta
aatgaatttagtactaagaaagtaattggaaagtatttaattttgcttgatgctaaacaa
gcagtagaagttaagtaa
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