Lactobacillus amylovorus GRL 1112: LA2_08635
Help
Entry
LA2_08635 CDS
T01371
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lam
Lactobacillus amylovorus GRL 1112
Pathway
lam03030
DNA replication
lam03410
Base excision repair
lam03420
Nucleotide excision repair
lam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LA2_08635
03410 Base excision repair
LA2_08635
03420 Nucleotide excision repair
LA2_08635
03440 Homologous recombination
LA2_08635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lam03032
]
LA2_08635
03400 DNA repair and recombination proteins [BR:
lam03400
]
LA2_08635
Enzymes [BR:
lam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LA2_08635
DNA replication proteins [BR:
lam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LA2_08635
DNA repair and recombination proteins [BR:
lam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LA2_08635
NER (nucleotide excision repair)
GGR (global genome repair) factors
LA2_08635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
DUF61
Polysacc_deac_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ADQ59636
UniProt:
E4SLN9
LinkDB
All DBs
Position
complement(1637435..1640098)
Genome browser
AA seq
887 aa
AA seq
DB search
MADKKLLLIDGNSVAFRAFYALYRQLESFKSPDGLHTNAIYAFKNMLDVLLKDIDPTHVL
VAFDAGKVTFRTKMYGEYKGGRAKTPEELLEQMPYIQEMLHDLGIKTYELKNYEADDIIG
TFVDKGEKNGFTTTVVTGDRDLTQLASDKTTVEVTKSGVSQLEAYTPEHMKEVNGVTPTE
FIDMKALMGDSSDNYPGVTKVGPKTASRLIQKYGSVEGIYDHIDEMKKSKLKENLINDKD
KAFLAKKLATIDRDSPVTLDIDDIKRQPVDYEKLRQFYEKMNFRKFLADLNASGAGQDST
EVEKVEYIVLNDDNVKDVKATEKDTVEFYLEMLGANYHLADFVGFSLKINDKIYVSRDVE
LLEEDNIKHILEDEKIKKNVFDLKRTMVAAHRLGIHTQGLDYDMLLASYLINNENNSNDL
GEIAHLYGDYSVKTDLEVYGKGKSEHIPDDDDELFNHLASKVNAIEKLKPELLKKLKEHE
QDALFDTIEIPTARVLARMEMNGMKVEASTLIQLQNEFAVKLKELEDKIYSQAGEKFNLN
SPKQLGHILFEKLGLPVIKKTKTGYSTSVEVLDQLKMQSPIVSEILDYRQIAKIQSTYVK
GLLDVIQPDGRVHTRYLQTLTATGRLSSVDPNLQNIPTRTEEGKQIRKAFVPSEPDGYIF
SCDYSQVELRVLAHVSGDQNMQEAFKTGYDIHSHTAMKIFHLDSPDQVTPLMRRHAKAVN
FGIVYGISDYGLSKNLGISRKRAQEFIDNYFEQYPQIKDYMDKAVQEARDKGYAETIMHR
RRYLPDIHAKKYTVRAFAERTAINSPIQGSAADIIKIAMINMQKKLDELHLKTKMVVQVH
DELIFDVPKDELETIKKIVPEVMQSAVKLDVPLIADSGWGHNWYDAK
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaaaaattacttctaatcgatggtaactctgtagctttcagagccttttac
gctctttatcgtcaactagaatctttcaagagtccggacggcctgcacactaatgccatt
tacgcttttaagaacatgctcgatgtccttttaaaagatattgatccgacccacgtattg
gtagcttttgatgcaggaaaagtcacttttagaacaaaaatgtacggcgaatacaaaggc
ggacgtgcaaaaactccggaagagttacttgaacaaatgccttatattcaagaaatgctt
cacgatctgggcattaaaacttacgaattaaagaattacgaagcagacgatattattggt
acttttgttgataaaggtgagaagaacggctttactactaccgttgtaactggtgaccgt
gacttgacccaacttgcgtccgacaagacgactgtcgaagtaactaaatctggtgtttct
caacttgaagcttatacaccagaacatatgaaggaagttaatggggtaactccaaccgaa
ttcatcgatatgaaggctttgatgggtgatagttcagataattatccaggtgttacaaaa
gttggccctaaaactgcatcacgtttgattcaaaaatacggttccgttgaagggatttac
gatcatatcgacgaaatgaagaagtccaagttaaaggaaaatttgatcaacgataaagac
aaggcctttttagctaagaaacttgccacgattgaccgtgattcaccggtaactctagat
atcgatgatataaaacgtcagccagttgattatgaaaagctgcgtcaattctacgaaaag
atgaacttccgcaagttcttagctgatttaaatgcttcaggtgctggtcaagatagtact
gaagttgaaaaagtagaatacatcgttttaaacgacgacaacgttaaagatgttaaagcc
actgaaaaagacactgttgaattttatctagaaatgctcggtgctaactaccacttagca
gattttgtcggctttagcttgaagatcaacgacaagatttatgtttcaagagacgtggaa
ttgcttgaagaagacaatatcaagcacatcttagaagatgaaaagatcaagaagaacgtc
tttgacctaaagagaacaatggttgctgcacatcgtttgggcattcacactcaaggtctt
gattacgacatgcttttggcatcttacttgattaataatgaaaataactccaacgatctt
ggtgaaattgcccatctttatggggattattccgttaagaccgaccttgaagtctacggc
aaaggtaagagtgaacacatccctgatgacgatgatgaattattcaaccacttagcttcc
aaggtcaacgccattgaaaaacttaagccggagcttcttaaaaagcttaaagaacacgaa
caggatgctttgtttgacacaatcgaaatcccaaccgcgcgcgttttagccagaatggaa
atgaacgggatgaaggtcgaagcaagtactttaattcaactgcaaaatgaatttgccgtt
aagttgaaagagcttgaagacaagatttacagtcaagctggtgaaaagttcaacttgaac
tcaccaaagcaattaggtcacattttgtttgaaaagcttggtttgccagtcatcaaaaag
accaagactggttactcaacctcagttgaagtcttggatcaattgaagatgcaaagccca
atcgttagcgaaattttggactatcgtcaaattgccaagattcaatctacctatgtaaag
ggtctgcttgatgttatccaaccagatggccgcgtccatacacgttacttgcaaactttg
actgccactggtcgtctttccagtgtggatcctaacttgcaaaatatccctacccgtacc
gaagaaggaaagcaaatcagaaaagctttcgtgccaagtgaaccagacggctacattttc
tcttgcgactactcacaagttgaacttcgtgttttagctcatgtttctggtgatcaaaac
atgcaagaagccttcaagaccggttatgatattcactcacataccgcgatgaagattttc
cacttggattcacctgatcaagtaacgccactgatgcgtcgccacgctaaagccgttaac
ttcggtattgtttacggcatttctgattacggtttgtccaagaacttaggcatttctaga
aaacgtgctcaagaatttatcgacaactacttcgaacaatatcctcaaatcaaggattac
atggataaggctgtgcaagaagcgcgtgacaaaggctatgccgaaacaattatgcaccgt
cgcagatacttgccagatattcacgctaagaagtacaccgtgcgtgccttcgctgaaaga
accgccatcaactcaccaatccaaggttcagctgccgatatcatcaagattgccatgatt
aacatgcaaaagaagcttgatgaattgcacctcaagaccaagatggtagttcaggtgcac
gacgaattaatttttgacgtgccaaaagatgaacttgaaacaatcaagaagattgtgcca
gaagtaatgcaatcagcagttaagcttgatgtgccactaattgctgattctggttggggc
cacaattggtacgatgcaaagtag
DBGET
integrated database retrieval system
