Lactobacillus amylovorus GRL 1112: LA2_08930
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Entry
LA2_08930 CDS
T01371
Name
(GenBank) CMP-binding factor
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lam
Lactobacillus amylovorus GRL 1112
Brite
KEGG Orthology (KO) [BR:
lam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lam03019
]
LA2_08930
Messenger RNA biogenesis [BR:
lam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LA2_08930
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
MIB_HERC2
Motif
Other DBs
NCBI-ProteinID:
ADQ59695
UniProt:
E4SLZ8
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All DBs
Position
complement(1695170..1696147)
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AA seq
325 aa
AA seq
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MLKRLLDYNDGEEMDIVVLIKNSQLRRNKKNKLFLAMQFGDGSGEIRGNFWDATNQDAAT
FSTGTIVELNGKREEYQGRPQIRIYSLRVVGPREGYELDQFVKSAPEPINDMHAEINQFV
DQIQNKTWKTIVQYLLKKWGRRFFDYPAGKSNHHAVRGGLAFHTLSMLKDAKGLADNYEQ
INRSLLYAGCILHDMGKVLELTGPAATQYTTEGNLVGHLVLIDEQIMLAAQDLKIDLESE
DLLLLRHMVLSHHGRLEYGSPKLPALLEAEILHRIDDMDAMVYAVTNALQHTGKGMFTEP
LLSQDGRRYYRPKYDPALDHAKHLE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaacgactcttagattataatgacggcgaagaaatggatatcgtcgttttgatt
aagaattcgcaattgcgacggaataagaaaaataagctctttttagcaatgcaatttggc
gatggatcaggcgagattcggggcaacttttgggatgcaaccaatcaagatgcggctacc
tttagtacaggtacgattgtagaattgaacggtaaaagagaagaataccaaggccgtcct
caaattcgcatttatagtttaagggtggttggaccacgagaaggctatgagttagatcaa
ttcgttaagtcagctccagaaccgattaatgatatgcatgccgaaattaatcaatttgtt
gatcagattcaaaataaaacttggaagacgattgtccaatatttgttaaaaaagtggggt
agacgcttctttgattatcccgcaggaaagagtaaccaccatgcagtgcgcggtggactt
gcttttcatactttgtcgatgcttaaggatgcgaagggtttagctgataattatgaacag
atcaaccgttcactgctttatgctggatgcatcttgcacgatatgggcaaagtgcttgaa
ctaacaggcccagctgcaacgcaatacactaccgaaggtaatttagttggtcacttggta
cttatcgatgaacaaattatgctagctgcccaagaccttaagattgaccttgaatcagag
gacttgcttttacttagacacatggttttgtcccaccatggccgcttggaatatggttca
cctaagttgccagctcttctggaagcagaaattttgcaccgcatcgatgatatggatgcc
atggtttatgcagtcacgaatgctttgcagcatactggtaaaggaatgtttactgagcca
ctgcttagtcaagatggcagaagatattatcgtccaaaatatgatccagctttagatcat
gccaagcatttggaataa
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