Lactobacillus amylovorus GRL 1112: LA2_09270
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Entry
LA2_09270 CDS
T01371
Name
(GenBank) DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lam
Lactobacillus amylovorus GRL 1112
Pathway
lam03030
DNA replication
lam03430
Mismatch repair
lam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LA2_09270
03430 Mismatch repair
LA2_09270
03440 Homologous recombination
LA2_09270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lam03032
]
LA2_09270
03400 DNA repair and recombination proteins [BR:
lam03400
]
LA2_09270
Enzymes [BR:
lam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LA2_09270
DNA replication proteins [BR:
lam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LA2_09270
DNA repair and recombination proteins [BR:
lam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LA2_09270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
BRCT
DNA_pol_B_exo1
DNApol_Exo
Motif
Other DBs
NCBI-ProteinID:
ADQ59761
UniProt:
E4SMD6
LinkDB
All DBs
Position
complement(1771821..1772777)
Genome browser
AA seq
318 aa
AA seq
DB search
MSIYVKNGILHVPGAQDKLRQKGQEIPDFLSNYTMLDIETTGLSPYRDRITELGAVKVRN
GQIVDQYTNLIKFPKNNKVPAFITKLNGITEEQIVNEGIPAEQAIKEFREFIDDDIIIGY
NVNFDLNFLYDLSQKYKLPILNNDYVDVLRLARAYYPRERHNRLIDCMQRAGIAQVEEHH
GLADSLDTIKVYNDFSAHFTDDLLEATRNKIKNVDLTGDDVDYIDLGFRNPVQNKNIVLS
GHIHMDEQDADKMIGNMGGKVEDKVNPMTNYLIMGDHDFFRKDNEDLNTARDLIKDGAKI
KRLSESFFLGMLDDWARS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagtatttacgtaaaaaacgggattctgcatgttcccggtgcccaagataagttgcgg
caaaaagggcaagaaatacctgactttttgtctaattacaccatgctggatattgaaacg
actggcctgagtccatacagagaccgcattacagaacttggtgcagtgaaggtcagaaac
ggccaaatcgttgaccaatatactaatttgatcaagttccctaagaacaataaggtgcct
gcttttattaccaaattgaatggcattactgaagaacaaatcgttaatgaggggattcct
gctgaacaagcgattaaggaattccgtgagttcatcgatgacgacattatcattggttat
aacgtcaactttgatctgaactttttatatgatttaagtcaaaagtacaagttgccaatc
ttaaataatgattacgtcgatgtgttacgcttagccagagcgtactatccacgcgaacgc
cacaatcgtttgattgactgcatgcagcgtgctggtatcgcgcaagtagaggagcaccac
ggtttagccgactcgcttgatacgatcaaggtctataacgactttagtgcgcacttcacc
gatgatttgcttgaagcgacacgtaacaagatcaagaacgttgatttaactggcgacgat
gtcgattacattgatctcggttttagaaatccggtccaaaataaaaacatcgttttatca
ggtcacattcatatggatgaacaagacgccgacaagatgattggcaacatgggtggtaag
gtcgaagataaggttaacccaatgaccaattatctgattatgggtgaccatgatttcttt
agaaaagacaacgaagatttgaatacggcacgtgatttgattaaagatggtgccaagatt
aagcgtttgtcagaaagcttctttttagggatgcttgatgactgggcacgaagttag
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